RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 GPR18Q14330 331 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 HNF4GQ14541 408 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 METAP1DQ6UB28 335 aaPredicted RBP12.99□□□□□ -0.33
SREBF1-202ENST00000355815 FAM122BQ7Z309 247 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 BPIFB2Q8N4F0 458 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 OR13C5Q8NGS8 318 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ABHD4Q8TB40 342 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 BPIFA2Q96DR5 249 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 APOBEC3BQ9UH17 382 aaKnown RBP12.99□□□□□ -0.33
SREBF1-202ENST00000355815 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 TRAPPC13A5PLN9 417 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 H7C417 338 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 HCRTR2O43614 444 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 PTHLHP12272 177 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 SLC26A5P58743 744 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ACTA2P62736 377 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ACTG2P63267 376 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 DUSP5Q16690 384 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ARTNQ5T4W7 220 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 CD276Q5ZPR3 534 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 TMUB2Q71RG4 321 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ARL14Q8N4G2 192 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 TSTD1Q8NFU3 115 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 SULT4A1Q9BR01 284 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 SLC6A20Q9NP91 592 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 GDE1Q9NZC3 331 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 NCOR1O75376 2440 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 CPED1A4D0V7 1026 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 CISD3P0C7P0 127 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 CTXN1P60606 82 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 UBE2IP63279 158 aaKnown RBP12.99□□□□□ -0.33
SREBF1-202ENST00000355815 GPR50Q13585 617 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 LAIR2Q6ISS4 152 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 RHOUQ7L0Q8 258 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 NANOGP1Q8N7R0 232 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 OR52R1Q8NGF1 315 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 ARL5BQ96KC2 179 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 WFDC6Q9BQY6 131 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 EPHX3Q9H6B9 360 aa12.99□□□□□ -0.33
SREBF1-202ENST00000355815 CCDC86Q9H6F5 360 aaKnown RBP12.99□□□□□ -0.33
SREBF1-202ENST00000355815 TCRBV16S1A1N1A0A5B0 115 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SCO2O43819 266 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 ADRB1P08588 477 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 RBMS1P29558 406 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 RAD52P43351 418 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 NR0B1P51843 470 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 RASGEF1BQ0VAM2 473 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 CHRFAM7AQ494W8 412 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 MS4A4EQ96PG1 132 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 HHATLQ9HCP6 504 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 APMAPQ9HDC9 416 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 PTTG3PQ9NZH4 202 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 DIMT1Q9UNQ2 313 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 ASXL3Q9C0F0 2248 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 A0A0U1RQK1 487 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 ZAR1LA6NP61 321 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 TSTD3H0UI37 97 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 UBL3O95164 117 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SEMA4FO95754 770 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 AKAIN1P0CW23 69 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 GAAP10253 952 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SNU13P55769 128 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 PRSS53Q2L4Q9 553 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 DCST2Q5T1A1 773 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 ZNF679Q8IYX0 411 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 TNFRSF13CQ96RJ3 184 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 MYADMQ96S97 322 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 TRAF4Q9BUZ4 470 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 POLMQ9NP87 494 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 GPR55Q9Y2T6 319 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 LAMA3Q16787 3333 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 NAP1L6A6NFF2 107 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 AGR2O95994 175 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 OPN1LWP04000 364 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SERPINA5P05154 406 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 PET100P0DJ07 73 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 RNH1P13489 461 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 MAKP20794 623 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 HNRNPA2B1P22626 353 aaKnown RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 NUDT1P36639 197 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 FXYD4P59646 89 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 OR1Q1Q15612 314 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 FAM160A2Q8N612 972 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 OR4D11Q8NGI4 311 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 OR13C9Q8NGT0 318 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 OR52I2Q8NH67 350 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 PFN4Q8NHR9 129 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 FOXRED1Q96CU9 486 aaPredicted RBP12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SLC35A4Q96G79 324 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 SCGB3A2Q96PL1 93 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 CYB5R1Q9UHQ9 305 aa12.98□□□□□ -0.33
SREBF1-202ENST00000355815 LDOC1O95751 146 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-202ENST00000355815 MPIG6BO95866 241 aa12.97□□□□□ -0.33
SREBF1-202ENST00000355815 TGM6O95932 706 aa12.97□□□□□ -0.33
SREBF1-202ENST00000355815 ERCC1P07992 297 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-202ENST00000355815 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
SREBF1-202ENST00000355815 SLC2A5P22732 501 aa12.97□□□□□ -0.33
SREBF1-202ENST00000355815 GNRHRP30968 328 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms