RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 FBXL4Q9UKA2 621 aa12.16□□□□□ -0.46
IFT88-202ENST00000351808 NOP16Q9Y3C1 178 aaKnown RBP12.16□□□□□ -0.46
IFT88-202ENST00000351808 ARL5CA6NH57 179 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 ZNF197O14709 1029 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 GYPBP06028 91 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 ZGLP1P0C6A0 271 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 LIPCP11150 499 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 CD1CP29017 333 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 SGSHP51688 502 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 RHOAP61586 193 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 PKIAP61925 76 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 CDC42EP1Q00587 391 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 OR8G1Q15617 311 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 RNF219Q5W0B1 726 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 ZNF772Q68DY9 489 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 SLC30A7Q8NEW0 376 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 OR1J2Q8NGS2 313 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 SMPDL3AQ92484 453 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 ATG101Q9BSB4 218 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TEX101Q9BY14 249 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TRPV4Q9HBA0 871 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 ZDHHC8Q9ULC8 765 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 ICKQ9UPZ9 632 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TP53TG5Q9Y2B4 290 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TIMM10BQ9Y5J6 103 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TRBV2A0A0J9YWF9 115 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TSTD3H0UI37 97 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 BLOC1S5-TXNDC5H3BN57 136 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 M0R036 132 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 GLSO94925 669 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 MPC1LP0DKB6 136 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 EPCAMP16422 314 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 TSPAN7P41732 249 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 PRKXP51817 358 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 CDK5R1Q15078 307 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 MRM1Q6IN84 353 aaKnown RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 PAPD4Q6PIY7 484 aaKnown RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 HS6ST3Q8IZP7 471 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 PAQR4Q8N4S7 273 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 OR4K14Q8NGD5 310 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 SECTM1Q8WVN6 248 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 OR5P2Q8WZ92 322 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 FBXO32Q969P5 355 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 SMIM19Q96E16 107 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 DUSP15Q9H1R2 295 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 UNKLQ9H9P5 680 aaKnown RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 ADGRL4Q9HBW9 690 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 INPP5EQ9NRR6 644 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 SIRT3Q9NTG7 399 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 WSB2Q9NYS7 404 aaPredicted RBP12.15□□□□□ -0.46
IFT88-202ENST00000351808 GDE1Q9NZC3 331 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 LHX3Q9UBR4 397 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 V9GY05 133 aa12.15□□□□□ -0.46
IFT88-202ENST00000351808 CNMDO75829 334 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SLC16A8O95907 504 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 IFNA10P01566 189 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 IGLV3-27P01718 113 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 MBP02144 154 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CHRM4P08173 479 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SNRPCP09234 159 aaKnown RBP12.14□□□□□ -0.47
IFT88-202ENST00000351808 EDN3P14138 238 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 IL9P15248 144 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CD34P28906 385 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 PPP2R1BP30154 601 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 ST3GAL3Q11203 375 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SLBPQ14493 270 aaKnown RBP eCLIP12.14□□□□□ -0.47
IFT88-202ENST00000351808 TCEAL6Q6IPX3 200 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SLCO4C1Q6ZQN7 724 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 AVL9Q8NBF6 648 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CYB561A3Q8NBI2 242 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 TMEM255BQ8WV15 326 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CCDC107Q8WV48 283 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 TFGQ92734 400 aaPredicted RBP12.14□□□□□ -0.47
IFT88-202ENST00000351808 DIO2Q92813 273 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 PPP1R16AQ96I34 528 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 ZNF559Q9BR84 538 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 MFRPQ9BY79 579 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SEMA6CQ9H3T2 930 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 C1orf198Q9H425 327 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 FBXO44Q9H4M3 255 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 DMRT3Q9NQL9 472 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 NCDNQ9UBB6 729 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 LPAR3Q9UBY5 353 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SH2B3Q9UQQ2 575 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 GOLGA4Q13439 2230 aaKnown RBP12.14□□□□□ -0.47
IFT88-202ENST00000351808 CASP8AP2Q9UKL3 1982 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 SLC16A5O15375 505 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CTNSO60931 367 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 IFNA17P01571 189 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 CD14P08571 375 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 AKAIN1P0CW23 69 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 PTGER1P34995 402 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 PSMB10P40306 273 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 NUTF2P61970 127 aaKnown RBP12.14□□□□□ -0.47
IFT88-202ENST00000351808 ACTBL2Q562R1 376 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 TTC9BQ8N6N2 239 aa12.14□□□□□ -0.47
IFT88-202ENST00000351808 KDF1Q8NAX2 398 aaPredicted RBP12.14□□□□□ -0.47
IFT88-202ENST00000351808 MIB2Q96AX9 1013 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms