RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SLC43A2Q8N370 569 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 ZNF843Q8N446 348 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 LNX2Q8N448 690 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 OR2T33Q8NG76 320 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 KATNB1Q9BVA0 655 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 TIGARQ9NQ88 270 aa19.21■□□□□ 0.67
TPM1-204ENST00000334895 GTF3C1Q12789 2109 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 M0R129 80 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 OR6A2O95222 327 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 CD14P08571 375 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 RPL4P36578 427 aaKnown RBP19.2■□□□□ 0.66
TPM1-204ENST00000334895 SMSP52788 366 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 CTXN1P60606 82 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 ERVK-25P63136 954 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 ABLIM2Q6H8Q1 611 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 FAM122BQ7Z309 247 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 ZHX1-C8orf76Q96EF9 292 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 NAA11Q9BSU3 229 aaPredicted RBP19.2■□□□□ 0.66
TPM1-204ENST00000334895 INIPQ9NRY2 104 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 PNPLA3Q9NST1 481 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 KLHL13Q9P2N7 655 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 GMPPBQ9Y5P6 360 aa19.2■□□□□ 0.66
TPM1-204ENST00000334895 TTLL8A6PVC2 850 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 KDM4EB2RXH2 506 aaPredicted RBP19.19■□□□□ 0.66
TPM1-204ENST00000334895 SERPINI2O75830 405 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 PLGP00747 810 aaPredicted RBP19.19■□□□□ 0.66
TPM1-204ENST00000334895 PON3Q15166 354 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 EMC4Q5J8M3 183 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 ZNF691Q5VV52 312 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 PXKQ7Z7A4 578 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 ADGRE4PQ86SQ3 457 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 OR5M9Q8NGP3 310 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 UBE2FQ969M7 185 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 MUS81Q96NY9 551 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 TSPAN32Q96QS1 320 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 ANKRD60Q9BZ19 345 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 IER3IP1Q9Y5U9 82 aa19.19■□□□□ 0.66
TPM1-204ENST00000334895 ALPK2Q86TB3 2170 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 LOC102725191A0A1B0GVB3 256 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 CLCA1A8K7I4 914 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ARPC3O15145 178 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 TAF11Q15544 211 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 TMEM225Q6GV28 225 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 WDFY1Q8IWB7 410 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 PM20D2Q8IYS1 436 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 FNDC9Q8TBE3 224 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 OXGR1Q96P68 337 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ERMAPQ96PL5 475 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 POLDIP3Q9BY77 421 aaKnown RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 PAQR5Q9NXK6 330 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 RASD1Q9Y272 281 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ZNF716A6NP11 495 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 TRAF3IP2O43734 574 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 AQP8O94778 261 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 PTGS2P35354 604 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 MLLT10P55197 1068 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 MYBPC1Q00872 1141 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 POU3F1Q03052 451 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 SLC17A1Q14916 467 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ACKR1Q16570 336 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ZNF362Q5T0B9 420 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 FCRLAQ7L513 359 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 GPAT4Q86UL3 456 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ANKK1Q8NFD2 765 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 FAM81AQ8TBF8 368 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ZPLD1Q8TCW7 415 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 RNF128Q8TEB7 428 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ABHD3Q8WU67 409 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 Q96M85 177 aa19.18■□□□□ 0.66
TPM1-204ENST00000334895 ING1Q9UK53 422 aaPredicted RBP19.18■□□□□ 0.66
TPM1-204ENST00000334895 CFAP46Q8IYW2 2715 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 DENRO43583 198 aaKnown RBP19.17■□□□□ 0.66
TPM1-204ENST00000334895 CYTIPO60759 359 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 SLC2A10O95528 541 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 IGHMP01871 453 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 APEHP13798 732 aaKnown RBP19.17■□□□□ 0.66
TPM1-204ENST00000334895 GRK5P34947 590 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 EFNB1P98172 346 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 TOP3AQ13472 1001 aaPredicted RBP19.17■□□□□ 0.66
TPM1-204ENST00000334895 POU4F3Q15319 338 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 SLC35F1Q5T1Q4 408 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 RASD2Q96D21 266 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 TXNDC15Q96J42 360 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 NDEL1Q9GZM8 345 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 TXNIPQ9H3M7 391 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 TVP23BQ9NYZ1 205 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 CLCF1Q9UBD9 225 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 AASSQ9UDR5 926 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 ZNF346Q9UL40 294 aaKnown RBP19.17■□□□□ 0.66
TPM1-204ENST00000334895 MCTS1Q9ULC4 181 aaKnown RBP19.17■□□□□ 0.66
TPM1-204ENST00000334895 BAIAP2Q9UQB8 552 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 SHANK1Q9Y566 2161 aa19.17■□□□□ 0.66
TPM1-204ENST00000334895 SURF4O15260 269 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 PRKYO43930 277 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 VAMP5O95183 116 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 SYNGR4O95473 234 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 TXNDC12O95881 172 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 TGM6O95932 706 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 IFNGR1P15260 489 aa19.16■□□□□ 0.66
TPM1-204ENST00000334895 MYF6P23409 242 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms