RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 FZD5Q13467 585 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 LRFN4Q6PJG9 635 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ARSKQ6UWY0 536 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 TMPRSS11FQ6ZWK6 438 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 TMPRSS12Q86WS5 348 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 PLXDC1Q8IUK5 500 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF615Q8N8J6 731 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF527Q8NB42 609 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 LCORQ96JN0 433 aaPredicted RBP9.69□□□□□ -0.86
CUL4A-201ENST00000326335 RXFP3Q9NSD7 469 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 SATB2Q9UPW6 733 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ATMQ13315 3056 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 TRDV1A0A1B0GX56 115 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 A0A1W2PNR3 127 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 A0A1W2PR77 199 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 GPR143P51810 404 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 NXPH1P58417 271 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 SMAD4Q13485 552 aaKnown RBP9.69□□□□□ -0.86
CUL4A-201ENST00000326335 PRAMEF8Q5VWM4 474 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 PRAMEF7Q5VXH5 474 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 PWWP2BQ6NUJ5 590 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 FCRLAQ7L513 359 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 OR8S1Q8NH09 359 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 FRMD6Q96NE9 622 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 TIMP4Q99727 224 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 NCDNQ9UBB6 729 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 LYRM1O43325 122 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 FASLGP48023 281 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 SIRPAP78324 504 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 KRR1Q13601 381 aaKnown RBP9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.69□□□□□ -0.864e-6■□□□□ 9.4
CUL4A-201ENST00000326335 AGAP6Q5VW22 663 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 LIPNQ5VXI9 398 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 OR6V1Q8N148 313 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 ITFG2Q969R8 447 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 AGAP4Q96P64 663 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 SUSD2Q9UGT4 822 aa9.69□□□□□ -0.86
CUL4A-201ENST00000326335 IGKV1D-42A0A075B6H8 117 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 A0A087WUJ7 227 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 TRBV11-1A0A0K0K1C0 115 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CENPXA8MT69 81 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 PTP4A3O75365 173 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 SCRG1O75711 98 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZFPL1O95159 310 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CCKBRP32239 447 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 HSD17B7P56937 341 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 TCTE1Q5JU00 501 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 MZT2AQ6P582 158 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 NCCRP1Q6ZVX7 275 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FGF11Q92914 225 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF578Q96N58 590 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CPNE5Q9HCH3 593 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FLVCR2Q9UPI3 526 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 IRGMA1A4Y4 181 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 B4DXG7 233 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FLRT2O43155 660 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 SIGLEC6O43699 453 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 AKR7A3O95154 331 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 PRKAR1AP10644 381 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 GIFP27352 417 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CCL7P80098 99 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 OC90Q02509 493 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 EGR4Q05215 589 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 HSD17B12Q53GQ0 312 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 OR10K2Q6IF99 312 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 LCN10Q6JVE6 187 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 C19orf48Q6RUI8 117 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF417Q8TAU3 575 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 CHAC2Q8WUX2 184 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 DNAJA4Q8WW22 397 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 SPACA5Q96QH8 159 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF587Q96SQ5 575 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF649Q9BS31 505 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 THAP7Q9BT49 309 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 LANCL2Q9NS86 450 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 POLR1DQ9Y2S0 133 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 DCDC2BA2VCK2 349 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FMO6PO60774 539 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FZD7O75084 574 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 AK1P00568 194 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 TMIGD3P0DMS9 266 aaPredicted RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 GP1BBP13224 206 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 PLA2G7Q13093 441 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 FAM220AQ7Z4H9 259 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 RNF113BQ8IZP6 322 aaKnown RBP9.68□□□□□ -0.86
CUL4A-201ENST00000326335 NPEPL1Q8NDH3 523 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 GAREM1Q9H706 876 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 C14orf105Q9NVL8 296 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ZNF337Q9Y3M9 751 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 ALG5Q9Y673 324 aa9.68□□□□□ -0.86
CUL4A-201ENST00000326335 A0A0B4J293 547 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 ISPDA4D126 451 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 SUSD5O60279 629 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 OR7A10O76100 309 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 HTR3AP46098 478 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 PPP3R1P63098 170 aa9.67□□□□□ -0.86
CUL4A-201ENST00000326335 POU3F1Q03052 451 aaPredicted RBP9.67□□□□□ -0.86
CUL4A-201ENST00000326335 LGALS3BPQ08380 585 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms