RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 NOX1Q9Y5S8 564 aa12.89□□□□□ -0.35
TUBA3D-201ENST00000321253 MS4A18H0YCH9 400 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PLPP3O14495 311 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 TRAF3IP2O43734 574 aaPredicted RBP12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 FAM107AO95990 144 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ADORA3P0DMS8 318 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 THRBP10828 461 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 NCK1P16333 377 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MXRA7P84157 204 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 BSPH1Q075Z2 132 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 FOXD4Q12950 439 aaPredicted RBP12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MS4A18Q3C1V0 323 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 IFI44LQ53G44 452 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 NCMAPQ5T1S8 102 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 HMBOX1Q6NT76 420 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 KLHL17Q6TDP4 642 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 CBLL1Q75N03 491 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 VTCN1Q7Z7D3 282 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 LURAP1LQ8IV03 231 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 GPR137CQ8N3F9 429 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PIK3C3Q8NEB9 887 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PRRC1Q96M27 445 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ALPK1Q96QP1 1244 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PRSS27Q9BQR3 290 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 TMEM204Q9BSN7 226 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 LINC00470Q9BZP3 86 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 AMBRA1Q9C0C7 1298 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ARL8BQ9NVJ2 186 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 NDE1Q9NXR1 346 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ZNF229Q9UJW7 825 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 A0A1W2PR80 420 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 C11orf98E9PRG8 122 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 UPK3AO75631 287 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 SERPINI2O75830 405 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 HPRP00739 348 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PLAUP00749 431 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MT-ND1P03886 318 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 HLA-DOBP13765 273 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 CD53P19397 219 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MNAT1P51948 309 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ROR2Q01974 943 aaKnown RBP12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 LGALS3BPQ08380 585 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ST3GAL3Q11203 375 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 TESK1Q15569 626 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 DEFB113Q30KQ7 82 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 SEZ6L2Q6UXD5 910 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PXKQ7Z7A4 578 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 NKAIN4Q8IVV8 208 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PGAM4Q8N0Y7 254 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 RNF148Q8N7C7 305 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 TMEM255BQ8WV15 326 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 TMEM239Q8WW34 195 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 PIGTQ969N2 578 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 HSH2DQ96JZ2 352 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 HS6ST2Q96MM7 605 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 CCL19Q99731 98 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 SLC17A5Q9NRA2 495 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 EGFL7Q9UHF1 273 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 RPS6KA6Q9UK32 745 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 AMDHD2Q9Y303 409 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MED31Q9Y3C7 131 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 MAGED1Q9Y5V3 778 aaPredicted RBP12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 SLC25A15Q9Y619 301 aa12.88□□□□□ -0.35
TUBA3D-201ENST00000321253 ROS1P08922 2347 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 ZNF726A6NNF4 738 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 ZNF432O94892 652 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 ZNF83P51522 516 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 SH3BGRP55822 239 aaPredicted RBP12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 PRPS1P60891 318 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 C1QTNF12Q5T7M4 302 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 GLYATQ6IB77 296 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 C16orf89Q6UX73 402 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 TMEM108Q6UXF1 575 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 NANOGNBQ7Z5D8 188 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 CCDC197Q8NCU1 140 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 ANKK1Q8NFD2 765 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 AKAP1Q92667 903 aaKnown RBP eCLIP12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 OR2M2Q96R28 347 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 FNDC11Q9BVV2 318 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 MED29Q9NX70 200 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 NPAP1Q9NZP6 1156 aa12.87□□□□□ -0.35
TUBA3D-201ENST00000321253 DPRXA6NFQ7 191 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 HS3ST1O14792 307 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 RNF13O43567 381 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 WNT11O96014 354 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 TCN1P20061 433 aaPredicted RBP12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 YAP1P46937 504 aaKnown RBP12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 UGT2B15P54855 530 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 UBE2NP61088 152 aaKnown RBP12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 SLC25A3Q00325 362 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 KRT72Q14CN4 511 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 HIKESHIQ53FT3 197 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 SAMD4BQ5PRF9 694 aaKnown RBP12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 CARD17Q5XLA6 110 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 ADAM5Q6NVV9 412 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 SPNS3Q6ZMD2 512 aa12.86□□□□□ -0.35
TUBA3D-201ENST00000321253 CYP4Z1Q86W10 505 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms