RNA–Protein interactions for RNA: ENST00000320054.4

PRPF18-201, Transcript of pre-mRNA processing factor 18, humanhuman

TSL 5

Gene PRPF18, Length 788 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-201ENST00000320054 INIPQ9NRY2 104 aa12.16□□□□□ -0.46
PRPF18-201ENST00000320054 TNFRSF10DQ9UBN6 386 aa12.16□□□□□ -0.46
PRPF18-201ENST00000320054 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
PRPF18-201ENST00000320054 ZNF175Q9Y473 711 aa12.16□□□□□ -0.46
PRPF18-201ENST00000320054 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
PRPF18-201ENST00000320054 NOX1Q9Y5S8 564 aa12.16□□□□□ -0.46
PRPF18-201ENST00000320054 COL6A6A6NMZ7 2263 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 TTLL8A6PVC2 850 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 IMPA2O14732 288 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 CYTIPO60759 359 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 TXNDC12O95881 172 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 IGHMP01871 453 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 HMGN1P05114 100 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 EDN3P14138 238 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 KLK2P20151 261 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 SLC16A1P53985 500 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 CTXN1P60606 82 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 PDK3Q15120 406 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 C3AR1Q16581 482 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 PRR30Q53SZ7 412 aaPredicted RBP12.15□□□□□ -0.46
PRPF18-201ENST00000320054 CLEC12AQ5QGZ9 265 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 C6orf52Q5T4I8 152 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 GPR139Q6DWJ6 353 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 ACSM5Q6NUN0 579 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 NHLRC1Q6VVB1 395 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 Q6ZPB1 254 aaPredicted RBP12.15□□□□□ -0.46
PRPF18-201ENST00000320054 USP51Q70EK9 711 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 KATNB1Q9BVA0 655 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 TEX12Q9BXU0 123 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 PRRG3Q9BZD7 231 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 TXNIPQ9H3M7 391 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 B3GAT1Q9P2W7 334 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 IL20RAQ9UHF4 553 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 GMPPBQ9Y5P6 360 aa12.15□□□□□ -0.46
PRPF18-201ENST00000320054 KMT2BQ9UMN6 2715 aaPredicted RBP12.15□□□□□ -0.47
PRPF18-201ENST00000320054 IGHV3-15A0A0B4J1V0 119 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 A0A1W2PRG6 482 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 CLCA1A8K7I4 914 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 C11orf98E9PRG8 122 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 RAMP1O60894 148 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 WDR1O75083 606 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 PPP1R3DO95685 299 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 F13BP05160 661 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 HOXD4P09016 255 aaPredicted RBP12.14□□□□□ -0.47
PRPF18-201ENST00000320054 FCGR2AP12318 317 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 GABRA1P14867 456 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 AHCYP23526 432 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 PTGER4P35408 488 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 SLC17A1Q14916 467 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 EMC4Q5J8M3 183 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 TMEM236Q5W0B7 351 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 CASP12Q6UXS9 341 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 FCRLAQ7L513 359 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 FAM122BQ7Z309 247 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 IGFN1Q86VF2 1251 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 CCDC103Q8IW40 242 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 UEVLDQ8IX04 471 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 DEPDC4Q8N2C3 294 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 IQCF1Q8N6M8 205 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 SETD9Q8NE22 299 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 FAM57AQ8TBR7 257 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 RNF128Q8TEB7 428 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 TRUB1Q8WWH5 349 aaKnown RBP12.14□□□□□ -0.47
PRPF18-201ENST00000320054 ROBO4Q8WZ75 1007 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 ERMAPQ96PL5 475 aaPredicted RBP12.14□□□□□ -0.47
PRPF18-201ENST00000320054 SLC38A2Q96QD8 506 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 APOL4Q9BPW4 351 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 POLDIP3Q9BY77 421 aaKnown RBP12.14□□□□□ -0.47
PRPF18-201ENST00000320054 ANKRD60Q9BZ19 345 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 Q9H521 79 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 RNF122Q9H9V4 155 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 PNPLA3Q9NST1 481 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF835Q9Y2P0 537 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 IER3IP1Q9Y5U9 82 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 HSPE1-MOB4S4R3N1 261 aa12.14□□□□□ -0.47
PRPF18-201ENST00000320054 IGKV3D-15A0A087WSY6 115 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 SLC22A20A6NK97 555 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF716A6NP11 495 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 DENRO43583 198 aaKnown RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF43P17038 809 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 SDHAP31040 664 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 DAP3P51398 398 aaKnown RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 CDC42P60953 191 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 RPL27P61353 136 aaKnown RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ERVK-25P63136 954 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 MYBPC1Q00872 1141 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 POU3F1Q03052 451 aaPredicted RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 RBPJQ06330 500 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 NFATC3Q12968 1075 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 C1DQ13901 141 aaKnown RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 PON3Q15166 354 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 RNPS1Q15287 305 aaKnown RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ACKR1Q16570 336 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ACSF3Q4G176 576 aaPredicted RBP12.13□□□□□ -0.47
PRPF18-201ENST00000320054 ZNF691Q5VV52 312 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 FAM205BPQ63HN1 556 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 GTF2IRD2BQ6EKJ0 949 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 GFRALQ6UXV0 394 aa12.13□□□□□ -0.47
PRPF18-201ENST00000320054 SLC35D2Q76EJ3 337 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms