RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 LMAN1LQ9HAT1 526 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GABRQQ9UN88 632 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 GON4LQ3T8J9 2241 aa9.67□□□□□ -0.86
CLIP1-201ENST00000302528 SLC16A6O15403 523 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 HTR2CP28335 458 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ELLP55199 621 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 WDR5P61964 334 aaKnown RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR1Q1Q15612 314 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 BTNL8Q6UX41 500 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 THNSL2Q86YJ6 484 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 FRMD1Q8N878 549 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR7G3Q8NG95 312 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 SLC6A18Q96N87 628 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR52A1Q9UKL2 312 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 DUOX1Q9NRD9 1551 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 GABRR3A8MPY1 467 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 PIRO00625 290 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 DFFBO76075 338 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ACP2P11117 423 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 KIAA0141Q14154 515 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 CPZQ66K79 652 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 CPEB2Q7Z5Q1 589 aaKnown RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 SUMF1Q8NBK3 374 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 KCNG3Q8TAE7 436 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF251Q9BRH9 671 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 UTP23Q9BRU9 249 aaKnown RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 CALHM2Q9HA72 323 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 RYDENQ9NUL5 291 aaKnown RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 C4orf47A7E2U8 309 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF593O00488 134 aaPredicted RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ARHGAP33O14559 1287 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 FZD7O75084 574 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ZDHHC11BP0C7U3 371 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR13C7P0DN81 318 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 G0S2P27469 103 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 CD70P32970 193 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 MARCH8Q5T0T0 291 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 KCTD11Q693B1 232 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR6V1Q8N148 313 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR2M7Q8NG81 312 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 TFAP2CQ92754 450 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 C12orf42Q96LP6 360 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 DUSP23Q9BVJ7 150 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ANKRD60Q9BZ19 345 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 EVA1AQ9H8M9 152 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 PPP5D1E7EU14 171 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 GABRPO00591 440 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ADAM23O75077 832 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 NCR1O76036 304 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR1D4P47884 311 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ARSDP51689 593 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 GPLD1P80108 840 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ADPRMQ3LIE5 342 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 RAB6CQ53S08 254 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 TIMD4Q96H15 378 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 HRASLS5Q96KN8 279 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 NUDT9Q9BW91 350 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 ZNF416Q9BWM5 594 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 SORBS1Q9BX66 1292 aaKnown RBP9.66□□□□□ -0.86
CLIP1-201ENST00000302528 SLCO5A1Q9H2Y9 848 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 HSFX1Q9UBD0 423 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 RGPD2P0DJD1 1756 aa9.66□□□□□ -0.86
CLIP1-201ENST00000302528 OR8G3PP0DMU2 310 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CD1CP29017 333 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 UBE2IP63279 158 aaKnown RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 IAH1Q2TAA2 248 aaPredicted RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 PODNL1Q6PEZ8 512 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 DTWD1Q8N5C7 304 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CHST14Q8NCH0 376 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 SLC24A4Q8NFF2 622 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 PXT1Q8NFP0 134 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 BARHL1Q9BZE3 327 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 RAB18Q9NP72 206 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CEPT1Q9Y6K0 416 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KCPQ6ZWJ8 1503 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CYTIPO60759 359 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 ICAM2P13598 275 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 P2RX3P56373 397 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 BCL7AQ4VC05 210 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 OR4F15Q8NGB8 312 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 TMIGD2Q96BF3 282 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KIRREL1Q96J84 757 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 CNOT2Q9NZN8 540 aaKnown RBP9.65□□□□□ -0.86
CLIP1-201ENST00000302528 NFS1Q9Y697 457 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KIR2DS5A0A0G2JLQ3 304 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 A0A0G2JNG1 304 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KIR2DS3K7RE56 304 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 TNFSF8P32971 234 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 DCAF7P61962 342 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 ZP2Q05996 745 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 KIR2DS5Q14953 304 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 H2BFWTQ7Z2G1 175 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 PDZD3Q86UT5 571 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 VRK2Q86Y07 508 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 SFT2D1Q8WV19 159 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 BORCS6Q96GS4 357 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 OR7D2Q96RA2 312 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 TRIB1Q96RU8 372 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 MACROD1Q9BQ69 325 aa9.65□□□□□ -0.86
CLIP1-201ENST00000302528 NKX2-4Q9H2Z4 354 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms