RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ABHD4Q8TB40 342 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 IQCMA0A1B0GVH7 501 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 EIF4E2O60573 245 aaKnown RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 OR8G3PP0DMU2 310 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 SLC2A2P11168 524 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 GLYR1Q49A26 553 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 ACSM3Q53FZ2 586 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 LCN1P1Q5VSP4 162 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 GPALPP1Q8IXQ4 340 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 OR6V1Q8N148 313 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 HSD17B8Q92506 261 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 DEFB126Q9BYW3 111 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 RNF32Q9H0A6 362 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 METTL7AQ9H8H3 244 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 WDR76Q9H967 626 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 NCDNQ9UBB6 729 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 GPN3Q9UHW5 284 aaPredicted RBP16.25■□□□□ 0.19
CAPN1-201ENST00000279247 IKZF2Q9UKS7 526 aa16.25■□□□□ 0.19
CAPN1-201ENST00000279247 A0A1B0GTH9 108 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 TMEM200CA6NKL6 621 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 FAM25AB3EWG3 89 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 FAM25CB3EWG5 89 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 FAM25GB3EWG6 89 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 PRKCAP17252 672 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF385CQ66K41 422 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 AGBL5Q8NDL9 886 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF417Q8TAU3 575 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 RHBDD1Q8TEB9 315 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 ZNF587Q96SQ5 575 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 KCNN2Q9H2S1 579 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 KLHDC2Q9Y2U9 406 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 TRAV36DV7A0A075B6V5 113 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 XKRYO14609 159 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 PAHP00439 452 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 KLK3P07288 261 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 OR2T7P0C7T2 308 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 APEX1P27695 318 aaKnown RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 UQCRC1P31930 480 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 GDI2P50395 445 aaKnown RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 POLR2HP52434 150 aaKnown RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 SLC26A5P58743 744 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 POU4F2Q12837 409 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 C1orf140Q5VVS0 124 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 OR2T27Q8NH04 317 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 TAS2R5Q9NYW4 299 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 G3V3Y1 287 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 HLA-DOBP13765 273 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 CCKBRP32239 447 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 GBX2P52951 348 aaPredicted RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 ACSM1Q08AH1 577 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 DPY19L4Q7Z388 723 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 CADM3Q8N126 398 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 LRRC75AQ8NAA5 344 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 THAP4Q8WY91 577 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 ADAD1Q96M93 576 aaKnown RBP16.24■□□□□ 0.19
CAPN1-201ENST00000279247 OR14A2Q96R54 314 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 INPP5EQ9NRR6 644 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 HAO2Q9NYQ3 351 aa16.24■□□□□ 0.19
CAPN1-201ENST00000279247 TNRC6BQ9UPQ9 1833 aaKnown RBP16.23■□□□□ 0.19
CAPN1-201ENST00000279247 A0A0B4J203 849 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 PMS2P1A4D2B8 440 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 AHSA1O95433 338 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 BGLAPP02818 100 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 MPLP40238 635 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 OR7A5Q15622 319 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 ETFDHQ16134 617 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 CNIH2Q6PI25 160 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 MAMDC2Q7Z304 686 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-201ENST00000279247 GALNT6Q8NCL4 622 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 THEM6Q8WUY1 208 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 AP3S1Q92572 193 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 DDOQ99489 341 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 A0A1W2PQD3 144 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 ANKRD61A6NGH8 418 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 GLCEO94923 617 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 IL18Q14116 193 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 P2RY14Q15391 338 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 ACKR1Q16570 336 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 LINC01590Q5TEZ4 76 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 LRRC69Q6ZNQ3 347 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 SLC35D2Q76EJ3 337 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 GRINAQ7Z429 371 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
CAPN1-201ENST00000279247 PGLYRP3Q96LB9 341 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 ATF6BQ99941 703 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 PTDSS2Q9BVG9 487 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 JAM3Q9BX67 310 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 TSPAN10Q9H1Z9 355 aaPredicted RBP16.23■□□□□ 0.19
CAPN1-201ENST00000279247 SACM1LQ9NTJ5 587 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 PPP4R1LQ9P1A2 415 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 MYOTQ9UBF9 498 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 GTF2A1LQ9UNN4 478 aa16.23■□□□□ 0.19
CAPN1-201ENST00000279247 A0A1W2PQ09 198 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 TFECO14948 347 aaPredicted RBP16.22■□□□□ 0.19
CAPN1-201ENST00000279247 SQSTM1Q13501 440 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 SF3A2Q15428 464 aaKnown RBP16.22■□□□□ 0.19
CAPN1-201ENST00000279247 FAM69AQ5T7M9 428 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 POMGNT2Q8NAT1 580 aa16.22■□□□□ 0.19
CAPN1-201ENST00000279247 SEMA4CQ9C0C4 833 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms