RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 HTR2AP28223 471 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 SIRPAP78324 504 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 ELAVL1Q15717 326 aaKnown RBP11.77□□□□□ -0.52
HERC6-202ENST00000273960 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 ZNF627Q7L945 461 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 C17orf64Q86WR6 236 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 GLB1L2Q8IW92 636 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 SLC16A11Q8NCK7 471 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 OR51D1Q8NGF3 324 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 OR1J2Q8NGS2 313 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 ALG14Q96F25 216 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 CNTNAP3BQ96NU0 1288 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 OR7D2Q96RA2 312 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 TNFRSF13CQ96RJ3 184 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 GFI1Q99684 422 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 ZNF251Q9BRH9 671 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 SLC38A1Q9H2H9 487 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 IL21Q9HBE4 155 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 ADGRL4Q9HBW9 690 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 NRIP3Q9NQ35 241 aa11.77□□□□□ -0.52
HERC6-202ENST00000273960 YKT6O15498 198 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 HOXB1P14653 301 aaPredicted RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 CPN1P15169 458 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 CPT2P23786 658 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 AVPR2P30518 371 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 ID4P47928 161 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 FXYD6P3P58550 94 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 RPS27AP62979 156 aaKnown RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 UBA52P62987 128 aaKnown RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 SHC2P98077 582 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 PDZD11Q5EBL8 140 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 FAM122BQ7Z309 247 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 C7orf61Q8IZ16 206 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 ADAMTS15Q8TE58 950 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 PPP1R1CQ8WVI7 109 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 KISS1RQ969F8 398 aaPredicted RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 SELENOIQ9C0D9 397 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 TGIF2Q9GZN2 237 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 V9GY05 133 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 A0A1W2PR64 198 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 RPN2P04844 631 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 MGMTP16455 207 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 SDHAP31040 664 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 RPL4P36578 427 aaKnown RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 SKP1P63208 163 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 AMZ1Q400G9 498 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 DMKNQ6E0U4 476 aaPredicted RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 LINC00471Q8N535 108 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 FOXN4Q96NZ1 517 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 ELF4Q99607 663 aaPredicted RBP11.77□□□□□ -0.53
HERC6-202ENST00000273960 TBX21Q9UL17 535 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 ADAM18Q9Y3Q7 739 aa11.77□□□□□ -0.53
HERC6-202ENST00000273960 SERTM1A2A2V5 107 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 CARNS1A5YM72 827 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 C5orf51A6NDU8 294 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 WASH3PC4AMC7 463 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 ACOT7O00154 380 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 FOXE1O00358 373 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 OIP5O43482 229 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 LEFTY1O75610 366 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 ZNF28P17035 718 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 RORAP35398 523 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 BSGP35613 385 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 DHODHQ02127 395 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 ACSM1Q08AH1 577 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 HABP2Q14520 560 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 PXKQ7Z7A4 578 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 CDS1Q92903 461 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 HS6ST2Q96MM7 605 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 PIGMQ9H3S5 423 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 BRWD1Q9NSI6 2320 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 SLC22A31A6NKX4 558 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 EFCAB7A8K855 629 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 ERI3O43414 337 aaKnown RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 SOCS5O75159 536 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 TBX6O95947 436 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 AMY2AP04746 511 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 DCNP07585 359 aaKnown RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 TAS2R38P59533 333 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 SQSTM1Q13501 440 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 PWWP2BQ6NUJ5 590 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 MBOAT2Q6ZWT7 520 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 KRT77Q7Z794 578 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 NUP43Q8NFH3 380 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 HSPA12BQ96MM6 686 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 C1QTNF2Q9BXJ5 285 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 TMPRSS13Q9BYE2 586 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 RHBGQ9H310 441 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 BARX1Q9HBU1 254 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 FAM86C1Q9NVL1 165 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 SPEGQ15772 3267 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 PQLC2LA1A4F0 135 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 A6NLC8 198 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 CACNB4O00305 520 aaPredicted RBP11.76□□□□□ -0.53
HERC6-202ENST00000273960 ASGR2P07307 311 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 OR8G3PP0DMU2 310 aa11.76□□□□□ -0.53
HERC6-202ENST00000273960 NME1P15531 152 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms