RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 IL20RBQ6UXL0 311 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DPY19L2P2Q6ZN68 376 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PIP4P1Q86T03 277 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ETFBKMTQ8IXQ9 262 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 IZUMO1Q8IYV9 350 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LINC01555Q8NAE3 123 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF485Q8NCK3 441 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC16A11Q8NCK7 471 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR4E2Q8NGC2 313 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR52E2Q8NGJ4 325 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR51A7Q8NH64 312 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 NSMAFQ92636 917 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 KLK6Q92876 244 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DPYSL5Q9BPU6 564 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZFYVE21Q9BQ24 234 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC17A9Q9BYT1 436 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 C20orf85Q9H1P6 137 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC6A20Q9NP91 592 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HCN3Q9P1Z3 774 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CKLFQ9UBR5 152 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SCML1Q9UN30 329 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 MOKQ9UQ07 419 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR1A2Q9Y585 309 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 V9GY05 133 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TECTAO75443 2155 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3DA0A087WVF3 549 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3IA0A087WXS9 549 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LOC105369274A0A096LPK9 316 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 A0A0B4J293 547 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FAM221AA4D161 298 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ELOA3DA6NLF2 546 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 EFCAB7A8K855 629 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 C2orf74A8MZ97 194 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3LB9A6J9 549 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 KRBOX1C9JBD0 128 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 H3BUI4 141 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 BHLHE40O14503 412 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GPR171O14626 319 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SPINT1O43278 529 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 AKR7A2O43488 359 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HYAL3O43820 417 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 MOSPD3O75425 235 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PRKRAO75569 313 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 RBBP9O75884 186 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC2A10O95528 541 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 IL5P05113 134 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3HP0C7X1 549 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SULT1A3P0DMM9 295 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SULT1A4P0DMN0 295 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 EPXP11678 715 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 HOXB1P14653 301 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SEC13P55735 322 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 EEF1A1P68104 462 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SRSF1Q07955 248 aaKnown RBP eCLIP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CRYZQ08257 329 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ENPP2Q13822 863 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CRMP1Q14194 572 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LTB4RQ15722 352 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DUSP5Q16690 384 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ELOA3BQ3SY89 546 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DEFB134Q4QY38 66 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TP53I3Q53FA7 332 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CCDC157Q569K6 752 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SHEQ5VZ18 495 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3CQ6IPX1 549 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF425Q6IV72 752 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC25A25Q6KCM7 469 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 FIGLAQ6QHK4 219 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TBC1D3Q8IZP1 549 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR4N4Q8N0Y3 316 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 DTX3Q8N9I9 347 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ELOA3Q8NG57 546 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR7G2Q8NG99 324 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 OR6K6Q8NGW6 343 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF417Q8TAU3 575 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 LGALS14Q8TCE9 139 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TNFAIP8L1Q8WVP5 186 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 RSC1A1Q92681 617 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 RNF31Q96EP0 1072 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 WDR92Q96MX6 357 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF681Q96N22 645 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SMAD5Q99717 465 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF649Q9BS31 505 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 APOOQ9BUR5 198 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 GSX2Q9BZM3 304 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ISG20L2Q9H9L3 353 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 PARD6AQ9NPB6 346 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 CHST11Q9NPF2 352 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 TMEM138Q9NPI0 162 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 COMMD9Q9P000 198 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 APOBEC3BQ9UH17 382 aaKnown RBP3.66□□□□□ -1.82
SCN1A-214ENST00000637038 IL20RAQ9UHF4 553 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 SLC17A4Q9Y2C5 497 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 ZNF337Q9Y3M9 751 aa3.66□□□□□ -1.82
SCN1A-214ENST00000637038 A0A1W2PQU0 124 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 LINC01387J3KSC0 135 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 AIPO00170 330 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 OGG1O15527 345 aa3.65□□□□□ -1.82
SCN1A-214ENST00000637038 LINC01565O15544 149 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms