RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 PATL1Q86TB9 770 aaKnown RBP16.14■□□□□ 0.17
CLN6-214ENST00000636314 C17orf78Q8N4C9 275 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 LILRB1Q8NHL6 650 aaPredicted RBP16.14■□□□□ 0.17
CLN6-214ENST00000636314 IGFBPL1Q8WX77 278 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 NEUROG1Q92886 237 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 MUS81Q96NY9 551 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 SH3GL1Q99961 368 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 AMBRA1Q9C0C7 1298 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 CCDC134Q9H6E4 229 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 SAR1AQ9NR31 198 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 LAMP3Q9UQV4 416 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 SLC25A15Q9Y619 301 aa16.14■□□□□ 0.17
CLN6-214ENST00000636314 CR1P17927 2039 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 MXRA5Q9NR99 2828 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 A0A087WUJ7 227 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 M0QX08 132 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 M0R082 166 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ABCD4O14678 606 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 AIM2O14862 343 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ZNF43P17038 809 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 SELENOPP49908 381 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ZNF83P51522 516 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 SWT1Q5T5J6 900 aaKnown RBP16.13■□□□□ 0.17
CLN6-214ENST00000636314 NIPAL3Q6P499 406 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 TMEM108Q6UXF1 575 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 EPHX4Q8IUS5 362 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ZNF417Q8TAU3 575 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 SLC26A7Q8TE54 656 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 TAAR8Q969N4 342 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 LRRC58Q96CX6 371 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ALKBH3Q96Q83 286 aaPredicted RBP16.13■□□□□ 0.17
CLN6-214ENST00000636314 ZNF587Q96SQ5 575 aaPredicted RBP16.13■□□□□ 0.17
CLN6-214ENST00000636314 EPYCQ99645 322 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 MCHR1Q99705 422 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 ARHGDIGQ99819 225 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 WFDC6Q9BQY6 131 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 KLHL14Q9P2G3 628 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 SEC14L4Q9UDX3 406 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 AMDHD2Q9Y303 409 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 CADP27708 2225 aa16.13■□□□□ 0.17
CLN6-214ENST00000636314 OR6C65A6NJZ3 312 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 ZNF587BE7ETH6 402 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 FXYD1O00168 92 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 FMO6PO60774 539 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 FZD7O75084 574 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 LGI1O95970 557 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 C8BP07358 591 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 CDH2P19022 906 aaPredicted RBP16.12■□□□□ 0.17
CLN6-214ENST00000636314 PTNP21246 168 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 CBLP22681 906 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 GRPRP30550 384 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 CDH11P55287 796 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 IL1RL1Q01638 556 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 TNK1Q13470 666 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 NRF1Q16656 503 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 DUSP7Q16829 419 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 VMACQ2NL98 169 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 RABL3Q5HYI8 236 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 NANOGP8Q6NSW7 305 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 KLHL24Q6TFL4 600 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 SNX32Q86XE0 403 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 PIAS4Q8N2W9 510 aaPredicted RBP16.12■□□□□ 0.17
CLN6-214ENST00000636314 KDM8Q8N371 416 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 MAPK1IP1LQ8NDC0 245 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 GPR32P1Q8NGA4 272 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 OR8J3Q8NGG0 315 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 NANOS1Q8WY41 292 aaKnown RBP16.12■□□□□ 0.17
CLN6-214ENST00000636314 NANOGQ9H9S0 305 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 SLC17A5Q9NRA2 495 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 MGAT4BQ9UQ53 548 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 B3GALT5Q9Y2C3 310 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 MAGED1Q9Y5V3 778 aaPredicted RBP16.12■□□□□ 0.17
CLN6-214ENST00000636314 CAPN7Q9Y6W3 813 aa16.12■□□□□ 0.17
CLN6-214ENST00000636314 SHISA9B4DS77 424 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 M0R1B8 84 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 TPST2O60704 377 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 NQO1P15559 274 aaKnown RBP16.11■□□□□ 0.17
CLN6-214ENST00000636314 PAX1P15863 534 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 PTAFRP25105 342 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 CDH12P55289 794 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 CLDN17P56750 224 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 C1DQ13901 141 aaKnown RBP16.11■□□□□ 0.17
CLN6-214ENST00000636314 MFSD13AQ14CX5 517 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 ZNF613Q6PF04 617 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 PCYOX1LQ8NBM8 494 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 OR6T1Q8NGN1 323 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 VANGL1Q8TAA9 524 aaPredicted RBP16.11■□□□□ 0.17
CLN6-214ENST00000636314 SMAP2Q8WU79 429 aaPredicted RBP16.11■□□□□ 0.17
CLN6-214ENST00000636314 RASSF5Q8WWW0 418 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 TAMM41Q96BW9 452 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 RADILQ96JH8 1075 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 OXGR1Q96P68 337 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 ECSITQ9BQ95 431 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 ZNF701Q9NV72 531 aaPredicted RBP16.11■□□□□ 0.17
CLN6-214ENST00000636314 POU2F3Q9UKI9 436 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 RCE1Q9Y256 329 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 CORINQ9Y5Q5 1042 aa16.11■□□□□ 0.17
CLN6-214ENST00000636314 SONP18583 2426 aaKnown RBP16.1■□□□□ 0.17
CLN6-214ENST00000636314 CPSF4LA6NMK7 179 aaKnown RBP16.1■□□□□ 0.17
CLN6-214ENST00000636314 RNF212BA8MTL3 300 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms