RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 APOBEC3BQ9UH17 382 aaKnown RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 MLXQ9UH92 298 aa12.94□□□□□ -0.34
LDB3-209ENST00000623056 TP53BP1Q12888 1972 aaPredicted RBP12.94□□□□□ -0.34
LDB3-209ENST00000623056 H7C417 338 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 PSMD9O00233 223 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ZFPL1O95159 310 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 CXCL10P02778 98 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 DBIP07108 87 aaKnown RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 NID1P14543 1247 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 RPS4Y1P22090 263 aaKnown RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 CD96P40200 585 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 HFEQ30201 348 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 STAC2Q6ZMT1 411 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 DND1Q8IYX4 353 aaKnown RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 SLC25A28Q96A46 364 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ZNF558Q96NG5 402 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ZNF350Q9GZX5 532 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 TSPAN10Q9H1Z9 355 aaPredicted RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 FBXO34Q9NWN3 711 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 MTFP1Q9UDX5 166 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 SERTAD3Q9UJW9 196 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ETV7Q9Y603 341 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 ADRA2CP18825 462 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 CNR1P21554 472 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 LBX1P52954 281 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 C4orf46Q504U0 113 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ANKRD33Q7Z3H0 272 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 ZNF546Q86UE3 836 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 LRRC25Q8N386 305 aaPredicted RBP12.93□□□□□ -0.34
LDB3-209ENST00000623056 RAB42Q8N4Z0 105 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 CAMKVQ8NCB2 501 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 OR51S1Q8NGJ8 323 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 RPS4Y2Q8TD47 263 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 VWCEQ96DN2 955 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 COX14Q96I36 57 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 C10orf90Q96M02 699 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 CHST6Q9GZX3 395 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 CHRNA9Q9UGM1 479 aa12.93□□□□□ -0.34
LDB3-209ENST00000623056 DENND4AQ7Z401 1863 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 RNGTTO60942 597 aaKnown RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 ATG12O94817 140 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 EGFP01133 1207 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 PRNPP04156 253 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 STARP49675 285 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 MLF2Q15773 248 aaPredicted RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 MAMSTRQ6ZN01 415 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 KRT77Q7Z794 578 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 DOK4Q8TEW6 326 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 HERVK_113Q902F9 699 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 INSM2Q96T92 566 aaPredicted RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 LGR4Q9BXB1 951 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 WDR13Q9H1Z4 485 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 ESRP2Q9H6T0 727 aaKnown RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 TCF7L1Q9HCS4 588 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 APMAPQ9HDC9 416 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 HCFC1R1Q9NWW0 138 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 COA4Q9NYJ1 87 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 WNT6Q9Y6F9 365 aa12.92□□□□□ -0.34
LDB3-209ENST00000623056 SNRNP200O75643 2136 aaKnown RBP12.92□□□□□ -0.34
LDB3-209ENST00000623056 GPR31O00270 319 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 GP1BAP07359 652 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 NGFRP08138 427 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 CSF1P09603 554 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 NAT2P11245 290 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 ADRB3P13945 408 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 DIO1P49895 249 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 RAB28P51157 221 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 BTN3A2P78410 334 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 PON3Q15166 354 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 DCST2Q5T1A1 773 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 TMEM88Q6PEY1 159 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 TMEM185AQ8NFB2 350 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 DUSP19Q8WTR2 217 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 RNF166Q96A37 237 aaPredicted RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 HSPA12BQ96MM6 686 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 SLC39A1Q9NY26 324 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 MAFFQ9ULX9 164 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 ABHD14A-ACY1A0A1B0GW23 586 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 PRR32B1ATL7 298 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 XRCC3O43542 346 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 RASGRP1O95267 797 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 GRPRP30550 384 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 S100A12P80511 92 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 PLAURQ03405 335 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 LTBQ06643 244 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 SCRN3Q0VDG4 424 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 YOD1Q5VVQ6 348 aaPredicted RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 ERN2Q76MJ5 926 aaKnown RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 OR4N5Q8IXE1 308 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 SLC35F3Q8IY50 421 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 BOLLQ8N9W6 283 aaKnown RBP12.91□□□□□ -0.34
LDB3-209ENST00000623056 ZNF559Q9BR84 538 aa12.91□□□□□ -0.34
LDB3-209ENST00000623056 GPR174Q9BXC1 333 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms