RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 S100A3P33764 101 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 CDKN2CP42773 168 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 COMPP49747 757 aaPredicted RBP8.6□□□□□ -1.03
LIG1-209ENST00000596104 CLNS1AP54105 237 aaKnown RBP8.6□□□□□ -1.03
LIG1-209ENST00000596104 CCNIQ14094 377 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 WBP2NLQ6ICG8 309 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 UGT2A3Q6UWM9 527 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 ZNF836Q6ZNA1 936 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 KDM8Q8N371 416 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 CADM2Q8N3J6 435 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 MFSD8Q8NHS3 518 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 KIF18AQ8NI77 898 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 STK35Q8TDR2 534 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 ZNF837Q96EG3 531 aaPredicted RBP8.6□□□□□ -1.03
LIG1-209ENST00000596104 PTDSS2Q9BVG9 487 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 C20orf27Q9GZN8 174 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 RACGAP1Q9H0H5 632 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 TPK1Q9H3S4 243 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 OCEL1Q9H607 264 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 METTL17Q9H7H0 456 aaPredicted RBP8.6□□□□□ -1.03
LIG1-209ENST00000596104 NOX3Q9HBY0 568 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 DYNLRB1Q9NP97 96 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 B3GAT1Q9P2W7 334 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 CHST2Q9Y4C5 530 aa8.6□□□□□ -1.03
LIG1-209ENST00000596104 MEGF8Q7Z7M0 2845 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 AHSA1O95433 338 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 SERPINE1P05121 402 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 MYZAPP0CAP1 466 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 IL12AP29459 219 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 ARR3P36575 388 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 ANXA11P50995 505 aaKnown RBP8.59□□□□□ -1.03
LIG1-209ENST00000596104 MVDP53602 400 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 CLDN17P56750 224 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 IL1RL1Q01638 556 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 EGR4Q05215 589 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 NPRL3Q12980 569 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 SNTB2Q13425 540 aaKnown RBP8.59□□□□□ -1.03
LIG1-209ENST00000596104 LIN52Q52LA3 116 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 ELFN2Q5R3F8 820 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 RNF220Q5VTB9 566 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 MDP1Q86V88 176 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 GLCCI1Q86VQ1 547 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 CARM1Q86X55 608 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 NUDCD3Q8IVD9 361 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 LRRC34Q8IZ02 419 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 CLIP4Q8N3C7 705 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 TRIML2Q8N7C3 387 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 IL17RDQ8NFM7 739 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 OR52P1PQ8NH57 321 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 CLDND2Q8NHS1 167 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 PNPT1Q8TCS8 783 aaKnown RBP8.59□□□□□ -1.03
LIG1-209ENST00000596104 MRPL24Q96A35 216 aaKnown RBP8.59□□□□□ -1.03
LIG1-209ENST00000596104 PKNOX2Q96KN3 472 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 PANX1Q96RD7 426 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 MRPL37Q9BZE1 423 aaKnown RBP8.59□□□□□ -1.03
LIG1-209ENST00000596104 GPR35Q9HC97 309 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 SEC14L4Q9UDX3 406 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 HAO1Q9UJM8 370 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 RAP2CQ9Y3L5 183 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 SPEF1Q9Y4P9 236 aa8.59□□□□□ -1.03
LIG1-209ENST00000596104 A0A096LPI6 279 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 TMEM89A2RUT3 159 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 FAM157AC9JC47 383 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 SYNGR3O43761 229 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 SLC43A1O75387 559 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 SEC14L2O76054 403 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 GSNP06396 782 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 MSMBP08118 114 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 ALDOCP09972 364 aaKnown RBP8.58□□□□□ -1.04
LIG1-209ENST00000596104 LBPP18428 481 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 NR4A1P22736 598 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 EVX1P49640 407 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 ABCE1P61221 599 aaKnown RBP8.58□□□□□ -1.04
LIG1-209ENST00000596104 COPZ1P61923 177 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 UFM1P61960 85 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 DAG1Q14118 895 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 CEACAM16Q2WEN9 425 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 KRT80Q6KB66 452 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 OGFOD2Q6N063 350 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 ZNF621Q6ZSS3 439 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 CCDC36Q8IYA8 594 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 TMEM123Q8N131 208 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 TMEM186Q96B77 213 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 KTI12Q96EK9 354 aaPredicted RBP8.58□□□□□ -1.04
LIG1-209ENST00000596104 ZNF75AQ96N20 296 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 OXGR1Q96P68 337 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 SORT1Q99523 831 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 CRLF2Q9HC73 371 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 SLC6A13Q9NSD5 602 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 AIG1Q9NVV5 245 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 HIF1ANQ9NWT6 349 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 B3GNT2Q9NY97 397 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 ZNF443Q9Y2A4 671 aaPredicted RBP8.58□□□□□ -1.04
LIG1-209ENST00000596104 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.58□□□□□ -1.04
LIG1-209ENST00000596104 CMAHPQ9Y471 501 aa8.58□□□□□ -1.04
LIG1-209ENST00000596104 LOC102725191A0A1B0GVB3 256 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 WDR91A4D1P6 747 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 M0R233 179 aa8.57□□□□□ -1.04
LIG1-209ENST00000596104 WNT9BO14905 357 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms