RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 NKIRAS1Q9NYS0 192 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 SEC14L4Q9UDX3 406 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 PCDHB14Q9Y5E9 798 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 MXRA5Q9NR99 2828 aa17.82■□□□□ 0.44
TRIM47-207ENST00000593089 ARPC4-TTLL3A0A0A6YYG9 625 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 CLIC1O00299 241 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 SERPINF1P36955 418 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 MAGOHP61326 146 aaKnown RBP17.81■□□□□ 0.44
TRIM47-207ENST00000593089 ROR2Q01974 943 aaKnown RBP17.81■□□□□ 0.44
TRIM47-207ENST00000593089 NAAAQ02083 359 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 ANKRD16Q6P6B7 361 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 SLC46A3Q7Z3Q1 461 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 TMEM158Q8WZ71 300 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 GTF2H4Q92759 462 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 KTI12Q96EK9 354 aaPredicted RBP17.81■□□□□ 0.44
TRIM47-207ENST00000593089 PIMREGQ9BSJ6 248 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 LINC00470Q9BZP3 86 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 PAIP1Q9H074 479 aaKnown RBP17.81■□□□□ 0.44
TRIM47-207ENST00000593089 NELFAQ9H3P2 528 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 SEC61A2Q9H9S3 476 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 BCL2L10Q9HD36 194 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 A4GALTQ9NPC4 353 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 TMEM160Q9NX00 188 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 RPS6KB2Q9UBS0 482 aa17.81■□□□□ 0.44
TRIM47-207ENST00000593089 VWC2LB2RUY7 222 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 C5orf58C9J3I9 102 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 PHF1O43189 567 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-207ENST00000593089 CECR9P0C854 216 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF43P17038 809 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 PAX7P23759 505 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 CALCRP30988 508 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 ARIH2OSQ8N7S6 290 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 BBS10Q8TAM1 723 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 MAGEE2Q8TD90 523 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-207ENST00000593089 SHARPINQ9H0F6 387 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 RAD21L1Q9H4I0 556 aa17.8■□□□□ 0.44
TRIM47-207ENST00000593089 CRNNQ9UBG3 495 aaPredicted RBP17.8■□□□□ 0.44
TRIM47-207ENST00000593089 B9A039 149 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 OR4A8P0C604 315 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 NR4A2P43354 598 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 GZMKP49863 264 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 SLC18A1P54219 525 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 ARF1P84077 181 aaKnown RBP17.79■□□□□ 0.44
TRIM47-207ENST00000593089 ADIPOQQ15848 244 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 OXGR1Q96P68 337 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF317Q96PQ6 595 aaPredicted RBP17.79■□□□□ 0.44
TRIM47-207ENST00000593089 LPAR3Q9UBY5 353 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 RCE1Q9Y256 329 aa17.79■□□□□ 0.44
TRIM47-207ENST00000593089 NDUFS8O00217 210 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 LMX1BO60663 402 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 SLC43A1O75387 559 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 IGLV1-44P01699 117 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 CELA3BP08861 270 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 CBLP22681 906 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 SH3BGRP55822 239 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-207ENST00000593089 IL1RL1Q01638 556 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 FADDQ13158 208 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 C1DQ13901 141 aaKnown RBP17.78■□□□□ 0.44
TRIM47-207ENST00000593089 MYPOPQ86VE0 399 aaPredicted RBP17.78■□□□□ 0.44
TRIM47-207ENST00000593089 GPR137CQ8N3F9 429 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 GOLGA6L1Q8N7Z2 621 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 NFKBIDQ8NI38 313 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 TAAR8Q969N4 342 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 SLC35B4Q969S0 331 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 FOXN4Q96NZ1 517 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 CHODLQ9H9P2 273 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 B3GAT1Q9P2W7 334 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 USH1CQ9Y6N9 552 aa17.78■□□□□ 0.44
TRIM47-207ENST00000593089 MALRD1Q5VYJ5 2156 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 M0R082 166 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 AIM2O14862 343 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 PDE5AO76074 875 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF432O94892 652 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 BMP2P12643 396 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 APEHP13798 732 aaKnown RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 HOXB9P17482 250 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 IGFBP5P24593 272 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 HTR2AP28223 471 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 STX1BP61266 288 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 C3orf36Q3SXR2 165 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 FAM69AQ5T7M9 428 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 EPGNQ6UW88 154 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 C6orf89Q6UWU4 347 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 IL17RELQ6ZVW7 336 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF417Q8TAU3 575 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 SLC38A4Q969I6 547 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF837Q96EG3 531 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 ZNF587Q96SQ5 575 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 PRR14Q9BWN1 585 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 RSPO3Q9BXY4 272 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 PLK3Q9H4B4 646 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 GPR35Q9HC97 309 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 MYOZ1Q9NP98 299 aaPredicted RBP17.77■□□□□ 0.44
TRIM47-207ENST00000593089 SLC25A37Q9NYZ2 338 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 KCNS2Q9ULS6 477 aa17.77■□□□□ 0.44
TRIM47-207ENST00000593089 STAB1Q9NY15 2570 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 IGHV4-61A0A0C4DH41 118 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 LOC100289279A0A1B0GTE1 492 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 A0A1B0GWA3 101 aa17.76■□□□□ 0.43
TRIM47-207ENST00000593089 LOC390937A0A1W2PQ73 354 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms