RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CLDN17P56750 224 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 TGFBR3Q03167 851 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 LTBQ06643 244 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 DUSP7Q16829 419 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 TRMT5Q32P41 509 aaKnown RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 HIKESHIQ53FT3 197 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 SLC22A25Q6T423 547 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 B3GLCTQ6Y288 498 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 LINGO2Q7L985 606 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 ABHD12BQ7Z5M8 362 aaPredicted RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 RANBP3LQ86VV4 465 aaPredicted RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 ZNF417Q8TAU3 575 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 GTPBP3Q969Y2 492 aaKnown RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 OXGR1Q96P68 337 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 ZNF587Q96SQ5 575 aaPredicted RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 ARHGDIGQ99819 225 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 BDH2Q9BUT1 245 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 TRAF4Q9BUZ4 470 aaPredicted RBP12.16□□□□□ -0.46
APOC1-208ENST00000592535 EVA1AQ9H8M9 152 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 SELENONQ9NZV5 590 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 KLHL14Q9P2G3 628 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 MGAT4BQ9UQ53 548 aa12.16□□□□□ -0.46
APOC1-208ENST00000592535 E7EQL1 145 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 ZNF587BE7ETH6 402 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 AIM2O14862 343 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 LGI1O95970 557 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 CD8AP01732 235 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 VIMP08670 466 aaKnown RBP12.15□□□□□ -0.46
APOC1-208ENST00000592535 ZNF43P17038 809 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 GZMMP51124 257 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 CDH12P55289 794 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 PRPS1P60891 318 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 GUCY1A3Q02108 690 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 KLF10Q13118 480 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 NPTX1Q15818 432 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 NRF1Q16656 503 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 RABL3Q5HYI8 236 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 NANOGP8Q6NSW7 305 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 CLEC9AQ6UXN8 241 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 DTX2Q86UW9 622 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 OR4D11Q8NGI4 311 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 OR6T1Q8NGN1 323 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 OR1K1Q8NGR3 316 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 TAMM41Q96BW9 452 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 POM121Q96HA1 1249 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 RADILQ96JH8 1075 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 MCHR1Q99705 422 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 LINC00470Q9BZP3 86 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 NANOGQ9H9S0 305 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 SAR1AQ9NR31 198 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 POU2F3Q9UKI9 436 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 RCE1Q9Y256 329 aa12.15□□□□□ -0.46
APOC1-208ENST00000592535 VPS13CQ709C8 3753 aa12.15□□□□□ -0.47
APOC1-208ENST00000592535 OR6C65A6NJZ3 312 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 FXYD1O00168 92 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 ZNF432O94892 652 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 LY6G6DO95868 133 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 HPRP00739 348 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 BGLAPP02818 100 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 C8BP07358 591 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 HOXB4P17483 251 aaPredicted RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 CD247P20963 164 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 IL1RL1Q01638 556 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 C1DQ13901 141 aaKnown RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 CYLC2Q14093 348 aaPredicted RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 VMACQ2NL98 169 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 TBRG1Q3YBR2 411 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 HSP90B2PQ58FF3 399 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 REP15Q6BDI9 236 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 KLHL24Q6TFL4 600 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 H1FNTQ75WM6 255 aaPredicted RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 PATL1Q86TB9 770 aaKnown RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 RBM45Q8IUH3 476 aaKnown RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 SLC30A8Q8IWU4 369 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 OR6S1Q8NH40 331 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 VANGL1Q8TAA9 524 aaPredicted RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 LRRC58Q96CX6 371 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 TRMT61AQ96FX7 289 aaKnown RBP12.14□□□□□ -0.47
APOC1-208ENST00000592535 BOD1Q96IK1 185 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 EPYCQ99645 322 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 ALG2Q9H553 416 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 B3GALT5Q9Y2C3 310 aa12.14□□□□□ -0.47
APOC1-208ENST00000592535 CPSF4LA6NMK7 179 aaKnown RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 LRRN3E7EW58 273 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 MS4A18H0YCH9 400 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 MRASO14807 208 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 TRAF3IP2O43734 574 aaPredicted RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 FMO6PO60774 539 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 NDUFS7O75251 213 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 WNT11O96014 354 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 NQO1P15559 274 aaKnown RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 TTKP33981 857 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 CRYBA2P53672 197 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ROR2Q01974 943 aaKnown RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 MS4A18Q3C1V0 323 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 MMEL1Q495T6 779 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 COQ5Q5HYK3 327 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 ENTPD8Q5MY95 495 aa12.13□□□□□ -0.47
APOC1-208ENST00000592535 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
APOC1-208ENST00000592535 INTS11Q5TA45 600 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms