RNA–Protein interactions for RNA: ENST00000578954.5

SS18-211, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 756 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-211ENST00000578954 Q9H521 79 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 NRIP3Q9NQ35 241 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 LUZP4Q9P127 313 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 NPIPA1Q9UND3 350 aa14.46□□□□□ -0.09
SS18-211ENST00000578954 DSPP15924 2871 aaKnown RBP14.45□□□□□ -0.1
SS18-211ENST00000578954 OR14I1A6ND48 311 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 NPIPB13A6NJU9 1138 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 NPIPB4C9JG80 1138 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 MCIDASD6RGH6 385 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 MS4A18H0YCH9 400 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ARPC3O15145 178 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 SEC14L5O43304 696 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 WISP2O76076 250 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 AKR7A3O95154 331 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 IGHMP01871 453 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ACADSP16219 412 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 MYF6P23409 242 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 POU1F1P28069 291 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 GRK5P34947 590 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 TDGF1P3P51864 188 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 SMSP52788 366 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 PUDPQ08623 228 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 GINS1Q14691 196 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 MS4A18Q3C1V0 323 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 GXYLT1Q4G148 440 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 KRTCAP3Q53RY4 240 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ALG10Q5BKT4 473 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ZNF691Q5VV52 312 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ACSM5Q6NUN0 579 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ARHGAP11AQ6P4F7 1023 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 NHLRC1Q6VVB1 395 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 TMEM99Q8N816 258 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 TEX19Q8NA77 164 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 RELTQ969Z4 430 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 CPNE4Q96A23 557 aaPredicted RBP14.45□□□□□ -0.1
SS18-211ENST00000578954 TSPAN10Q9H1Z9 355 aaPredicted RBP14.45□□□□□ -0.1
SS18-211ENST00000578954 PIEZO2Q9H5I5 2752 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 EXO5Q9H790 373 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 B3GAT1Q9P2W7 334 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 GMPPBQ9Y5P6 360 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 HSPE1-MOB4S4R3N1 261 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 ATMQ13315 3056 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 USP24Q9UPU5 2620 aa14.45□□□□□ -0.1
SS18-211ENST00000578954 BSNQ9UPA5 3926 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 KIAA1549Q9HCM3 1950 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 ZNF814B7Z6K7 855 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 BLOC1S5-TXNDC5H3BN57 136 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 IDH3BO43837 385 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 CXCL13O43927 109 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 TXNDC12O95881 172 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 CD14P08571 375 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 GNAO1P09471 354 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 ADORA3P0DMS8 318 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 CARD18P57730 90 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 RPS3AP61247 264 aaKnown RBP14.44□□□□□ -0.1
SS18-211ENST00000578954 EFNB1P98172 346 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 POU4F3Q15319 338 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 CLEC12AQ5QGZ9 265 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 TMEM236Q5W0B7 351 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 ABLIM2Q6H8Q1 611 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 FAM122BQ7Z309 247 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 UBQLNLQ8IYU4 475 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 IQCF1Q8N6M8 205 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 SETD9Q8NE22 299 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 FBLIM1Q8WUP2 373 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 FAR1Q8WVX9 515 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 SARAFQ96BY9 339 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 ZHX1-C8orf76Q96EF9 292 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 APOL4Q9BPW4 351 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 SLX1AQ9BQ83 275 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 NAA11Q9BSU3 229 aaPredicted RBP14.44□□□□□ -0.1
SS18-211ENST00000578954 TIGARQ9NQ88 270 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 INIPQ9NRY2 104 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 IL20RAQ9UHF4 553 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 RASD1Q9Y272 281 aa14.44□□□□□ -0.1
SS18-211ENST00000578954 SPTA1P02549 2419 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 IMPA2O14732 288 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 SMAD9O15198 467 aaKnown RBP14.43□□□□□ -0.1
SS18-211ENST00000578954 VAMP5O95183 116 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 OR6A2O95222 327 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 CLIC3O95833 236 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 HMGN1P05114 100 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 KLK2P20151 261 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 ENPP1P22413 925 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 EIF1AXP47813 144 aaKnown RBP14.43□□□□□ -0.1
SS18-211ENST00000578954 FGD2Q7Z6J4 655 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 PXKQ7Z7A4 578 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 ADGRE4PQ86SQ3 457 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 DEPDC4Q8N2C3 294 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 GHDCQ8N2G8 530 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 MARVELD2Q8N4S9 558 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 ANKK1Q8NFD2 765 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 MUS81Q96NY9 551 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 KATNB1Q9BVA0 655 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 IFT27Q9BW83 186 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 SF3B5Q9BWJ5 86 aaKnown RBP14.43□□□□□ -0.1
SS18-211ENST00000578954 POLDIP3Q9BY77 421 aaKnown RBP14.43□□□□□ -0.1
SS18-211ENST00000578954 PRRG3Q9BZD7 231 aa14.43□□□□□ -0.1
SS18-211ENST00000578954 A0A1B0GTH9 108 aa14.42□□□□□ -0.1
SS18-211ENST00000578954 SURF4O15260 269 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms