RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 KLHL14Q9P2G3 628 aa15.17■□□□□ 0.02
SMG6-212ENST00000573153 A0A087WUJ7 227 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 LOC102725191A0A1B0GVB3 256 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 OR6C65A6NJZ3 312 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 E7EQL1 145 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 ABCD4O14678 606 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 NDUFS7O75251 213 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 ZNF432O94892 652 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 LYPD3O95274 346 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 LY6G6DO95868 133 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 VIMP08670 466 aaKnown RBP15.16■□□□□ 0.02
SMG6-212ENST00000573153 CD40P25942 277 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 AQP1P29972 269 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 MAPRE2Q15555 327 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 OR1Q1Q15612 314 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 NPTX1Q15818 432 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 FAM69AQ5T7M9 428 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 C9orf135Q5VTT2 229 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 TMEM225Q6GV28 225 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 Q71RC1 249 aaPredicted RBP15.16■□□□□ 0.02
SMG6-212ENST00000573153 RANBP3LQ86VV4 465 aaPredicted RBP15.16■□□□□ 0.02
SMG6-212ENST00000573153 CALHM3Q86XJ0 350 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 ADPRHL1Q8NDY3 354 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 OR4D11Q8NGI4 311 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 TAAR8Q969N4 342 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 ZNF317Q96PQ6 595 aaPredicted RBP15.16■□□□□ 0.02
SMG6-212ENST00000573153 SH3GL1Q99961 368 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 SLCO5A1Q9H2Y9 848 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 TMEM27Q9HBJ8 222 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 SLC13A4Q9UKG4 626 aa15.16■□□□□ 0.02
SMG6-212ENST00000573153 TRAV36DV7A0A075B6V5 113 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 M0QX08 132 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 UPK3AO75631 287 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 THY1P04216 161 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 HEXAP06865 529 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 CD247P20963 164 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 MPGP29372 298 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 CDKN1AP38936 164 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 RPS5P46782 204 aaKnown RBP15.15■□□□□ 0.02
SMG6-212ENST00000573153 NCALDP61601 193 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 MFSD13AQ14CX5 517 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 DUSP7Q16829 419 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 VMACQ2NL98 169 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 INTS11Q5TA45 600 aaKnown RBP15.15■□□□□ 0.02
SMG6-212ENST00000573153 ZNF613Q6PF04 617 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 LINC00114Q6XXX2 140 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 AAED1Q7RTV5 226 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 GPAT4Q86UL3 456 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 KDM8Q8N371 416 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 OR10A6Q8NH74 314 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 LRRC58Q96CX6 371 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 SLC41A3Q96GZ6 507 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 TMEM43Q9BTV4 400 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 PCDHAC1Q9H158 963 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 CXorf56Q9H5V9 222 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 B3GALT5Q9Y2C3 310 aa15.15■□□□□ 0.02
SMG6-212ENST00000573153 CIB4A0PJX0 185 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 CCT8L1PA6NM43 557 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 AIM2O14862 343 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 TRAF3IP2O43734 574 aaPredicted RBP15.14■□□□□ 0.01
SMG6-212ENST00000573153 IGHV4-39P01824 125 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 MDH1P40925 334 aaKnown RBP15.14■□□□□ 0.01
SMG6-212ENST00000573153 ZNF83P51522 516 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 CDH11P55287 796 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 ATP5J2P56134 94 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 TGFBR3Q03167 851 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 REP15Q6BDI9 236 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 ABHD12BQ7Z5M8 362 aaPredicted RBP15.14■□□□□ 0.01
SMG6-212ENST00000573153 SMYD1Q8NB12 490 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 C10orf82Q8WW14 230 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 RASSF5Q8WWW0 418 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 TAMM41Q96BW9 452 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 RADILQ96JH8 1075 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 ALKBH3Q96Q83 286 aaPredicted RBP15.14■□□□□ 0.01
SMG6-212ENST00000573153 LINC00470Q9BZP3 86 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 CISD1Q9NZ45 108 aaKnown RBP15.14■□□□□ 0.01
SMG6-212ENST00000573153 UPB1Q9UBR1 384 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 RCE1Q9Y256 329 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 CORINQ9Y5Q5 1042 aa15.14■□□□□ 0.01
SMG6-212ENST00000573153 HEATR1Q9H583 2144 aaKnown RBP15.13■□□□□ 0.01
SMG6-212ENST00000573153 M0R082 166 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 MRASO14807 208 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 HPRP00739 348 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 BGLAPP02818 100 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 CR1P17927 2039 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 PTNP21246 168 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 PTAFRP25105 342 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 CDH12P55289 794 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 VEZF1Q14119 521 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 HIKESHIQ53FT3 197 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 RABL3Q5HYI8 236 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 WDR88Q6ZMY6 472 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 H1FNTQ75WM6 255 aaPredicted RBP15.13■□□□□ 0.01
SMG6-212ENST00000573153 SCAIQ8N9R8 606 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 ANKK1Q8NFD2 765 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 OR6T1Q8NGN1 323 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 OR1K1Q8NGR3 316 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 ZNF417Q8TAU3 575 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 SLC25A36Q96CQ1 311 aa15.13■□□□□ 0.01
SMG6-212ENST00000573153 OXGR1Q96P68 337 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms