RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 C1QCP02747 245 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 PAX7P23759 505 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 EFNA4P52798 201 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 CRISP3P54108 245 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 LARS2Q15031 903 aaKnown RBP11.49□□□□□ -0.57
SPG7-221ENST00000569720 COX20Q5RI15 118 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 LRIF1Q5T3J3 769 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 C6orf52Q5T4I8 152 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 TMEM225Q6GV28 225 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 WBP2NLQ6ICG8 309 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 ARPINQ7Z6K5 226 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 GPAT4Q86UL3 456 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 ZNF525Q8N782 197 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 TMEM99Q8N816 258 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 OR52P1PQ8NH57 321 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 HTRA1Q92743 480 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 KCNS3Q9BQ31 491 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 OBP2BQ9NPH6 170 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 CDC42EP3Q9UKI2 254 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 ZNF232Q9UNY5 417 aa11.49□□□□□ -0.57
SPG7-221ENST00000569720 ARFGEF3Q5TH69 2177 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 CUBNO60494 3623 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 CDHR4A6H8M9 788 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 OR6C65A6NJZ3 312 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 A8MVM7 634 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 NR5A2O00482 541 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 GKN3PP0CG01 181 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 CDH2P19022 906 aaPredicted RBP11.48□□□□□ -0.57
SPG7-221ENST00000569720 CRATP43155 626 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 VLDLRP98155 873 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 SLC25A3Q00325 362 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 SF3A3Q12874 501 aaKnown RBP eCLIP11.48□□□□□ -0.573e-6■■□□□ 13.3
SPG7-221ENST00000569720 ZNF836Q6ZNA1 936 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 VRK2Q86Y07 508 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 ARHGAP24Q8N264 748 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 OR9I1Q8NGQ6 314 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 TMEM158Q8WZ71 300 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 GTF2H4Q92759 462 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 PROX1Q92786 737 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 AURKBQ96GD4 344 aaPredicted RBP11.48□□□□□ -0.57
SPG7-221ENST00000569720 KCNK17Q96T54 332 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 RLIMQ9NVW2 624 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 ADPRHL2Q9NX46 363 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 ARMCX1Q9P291 453 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 FKBP7Q9Y680 259 aa11.48□□□□□ -0.57
SPG7-221ENST00000569720 DSPPQ9NZW4 1301 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 A0A096LNT2 108 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 LOC100653049A0A140TA62 436 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ZNF587BE7ETH6 402 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ATP6V1G2-DDX39BF2Z307 99 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 RRP9O43818 475 aaKnown RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 KRT34O76011 436 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 BCHEP06276 602 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 FAM157CP0CG43 387 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ACAA2P42765 397 aaKnown RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 DSTNP60981 165 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 UBE2NP61088 152 aaKnown RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 BNIP1Q12981 228 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 TRMT5Q32P41 509 aaKnown RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 HIKESHIQ53FT3 197 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 RNF220Q5VTB9 566 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 C1orf140Q5VVS0 124 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 CYB5R2Q6BCY4 276 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 C16orf89Q6UX73 402 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 SNX32Q86XE0 403 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ZIC4Q8N9L1 334 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 C10orf105Q8TEF2 133 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 FBXO17Q96EF6 278 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 BOD1Q96IK1 185 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ZNF385AQ96PM9 386 aaKnown RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 SPATA9Q9BWV2 254 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 BEX2Q9BXY8 128 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 TPT1P8Q9HAU6 139 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 TMEM160Q9NX00 188 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 LPAR3Q9UBY5 353 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 MOKQ9UQ07 419 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 RASD1Q9Y272 281 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 ZNF443Q9Y2A4 671 aaPredicted RBP11.47□□□□□ -0.57
SPG7-221ENST00000569720 IFT52Q9Y366 437 aa11.47□□□□□ -0.57
SPG7-221ENST00000569720 A0A0G2JPF8 293 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 HNRNPCL2B2RXH8 293 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 HNRNPCL3B7ZW38 293 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 MRASO14807 208 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 FRS3O43559 492 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 AHSA1O95433 338 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 F12P00748 615 aaPredicted RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 CRYAAP02489 173 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 TFPTP0C1Z6 253 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 HNRNPCL4P0DMR1 293 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 ETFAP13804 333 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 USF1P22415 310 aaPredicted RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 GTF2E2P29084 291 aaKnown RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 PDLIM4P50479 330 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 SNRPD2P62316 118 aaKnown RBP11.46□□□□□ -0.57
SPG7-221ENST00000569720 BNIP2Q12982 314 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 FADDQ13158 208 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 C6orf10Q5SRN2 563 aa11.46□□□□□ -0.57
SPG7-221ENST00000569720 PRAMEF8Q5VWM4 474 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms