RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 TPST2O60704 377 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 CELA3BP08861 270 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 ARAFP10398 606 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 UQCRBP14927 111 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 PPIBP23284 216 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 RPS5P46782 204 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 FADDQ13158 208 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 LARS2Q15031 903 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 NRF1Q16656 503 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 ELOA3BQ3SY89 546 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF311Q5JNZ3 666 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 LRIF1Q5T3J3 769 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 METTL21CQ5VZV1 264 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF544Q6NX49 715 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 C6orf89Q6UWU4 347 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 FBXL14Q8N1E6 418 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 POMGNT2Q8NAT1 580 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 ELOA3Q8NG57 546 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 NFKBIDQ8NI38 313 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 STK35Q8TDR2 534 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 TAAR8Q969N4 342 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 CACYBPQ9HB71 228 aaKnown RBP12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 YAE1D1Q9NRH1 226 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 MRGBPQ9NV56 204 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 FGFR1OP2Q9NVK5 253 aa12.06□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A096LPE4 126 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A1B0GWA3 101 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 A0A1W2PPZ6 126 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 HPRP00739 348 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 VIMP08670 466 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 CALCRP30988 508 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 PRPS1P60891 318 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 COPZ1P61923 177 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 ADRM1Q16186 407 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 TMEM249Q2WGJ8 235 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 PHYHD1Q5SRE7 291 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 PRAMEF8Q5VWM4 474 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 PRAMEF7Q5VXH5 474 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 TMEM225Q6GV28 225 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 NIPAL3Q6P499 406 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 NHLRC1Q6VVB1 395 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 CXXC5Q7LFL8 322 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 MFSD8Q8NHS3 518 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 C10orf105Q8TEF2 133 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 SLC25A36Q96CQ1 311 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 ADAD1Q96M93 576 aaKnown RBP12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 SORCS2Q96PQ0 1159 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 TMEM120AQ9BXJ8 343 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 PIF1Q9H611 641 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF385DQ9H6B1 395 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 LEF1Q9UJU2 399 aaPredicted RBP12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 CORO2BQ9UQ03 480 aa12.05□□□□□ -0.48
GTF3C1-211ENST00000569653 M0R082 166 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 ANGPT2O15123 496 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 TRAF3IP2O43734 574 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 TLX2O43763 284 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 AHSA1O95433 338 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 IGLV1-44P01699 117 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 CECR9P0C854 216 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 CLDN17P56750 224 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 TGFBR3Q03167 851 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 HGFACQ04756 655 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 LOXL1Q08397 574 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 C6orf52Q5T4I8 152 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 HIPK1Q86Z02 1210 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 BBS10Q8TAM1 723 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF417Q8TAU3 575 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 SLC38A2Q96QD8 506 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF587Q96SQ5 575 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 RHNO1Q9BSD3 238 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 TAPBPLQ9BX59 468 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 LINC00470Q9BZP3 86 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 KLHL14Q9P2G3 628 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 CRNNQ9UBG3 495 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 RASD1Q9Y272 281 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 IFT52Q9Y366 437 aa12.04□□□□□ -0.48
GTF3C1-211ENST00000569653 ARPC4-TTLL3A0A0A6YYG9 625 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 VWC2LB2RUY7 222 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ZNF587BE7ETH6 402 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 SEC14L2O76054 403 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 IGFBP1P08833 259 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 HLA-DOBP13765 273 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ETS2P15036 469 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 CBLP22681 906 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 GRPRP30550 384 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 PRKAR1BP31321 381 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 EFNA4P52798 201 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ARFIP2P53365 341 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ARF1P84077 181 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ROR2Q01974 943 aaKnown RBP12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 NAAAQ02083 359 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 SF3A3Q12874 501 aaKnown RBP eCLIP12.03□□□□□ -0.483e-6■■■■■ 29.5
GTF3C1-211ENST00000569653 RAB35Q15286 201 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 ADIPOQQ15848 244 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 GCNT6Q5T4J0 391 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 CLEC2AQ6UVW9 174 aa12.03□□□□□ -0.48
GTF3C1-211ENST00000569653 TMEM123Q8N131 208 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms