RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 ACAA2P42765 397 aaKnown RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 EMX2Q04743 252 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CHI3L2Q15782 390 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 PRAMEF8Q5VWM4 474 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 PRAMEF7Q5VXH5 474 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CARD17Q5XLA6 110 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 PEG10Q86TG7 708 aaKnown RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 GLCCI1Q86VQ1 547 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 NUP37Q8NFH4 326 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 NEU4Q8WWR8 484 aaPredicted RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 HPS1Q92902 700 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 GCDHQ92947 438 aaPredicted RBP12.79□□□□□ -0.36
USB1-214ENST00000568848 NEURL3Q96EH8 262 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 ZIM3Q96PE6 472 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 LRRC37BQ96QE4 947 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CRLF2Q9HC73 371 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 CHST2Q9Y4C5 530 aa12.79□□□□□ -0.36
USB1-214ENST00000568848 RPS4Y1P22090 263 aaKnown RBP12.78□□□□□ -0.36
USB1-214ENST00000568848 CXCR1P25024 350 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 HTR3AP46098 478 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 AQP5P55064 265 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 PIGFQ07326 219 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 DAG1Q14118 895 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 CASP8Q14790 479 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 CEACAM16Q2WEN9 425 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 CEP85LQ5SZL2 805 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 AVPI1Q5T686 147 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 AP1ARQ63HQ0 302 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 FAHD2BQ6P2I3 314 aaPredicted RBP12.78□□□□□ -0.36
USB1-214ENST00000568848 NUDCD3Q8IVD9 361 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 CLIP4Q8N3C7 705 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 ZNF781Q8N8C0 355 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 OR4F15Q8NGB8 312 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 C22orf15Q8WYQ4 148 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 TMEM186Q96B77 213 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 FAHD2AQ96GK7 314 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 DPY30Q9C005 99 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 C20orf27Q9GZN8 174 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 ZNF442Q9H7R0 627 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 GPR35Q9HC97 309 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 ESM1Q9NQ30 184 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 SLC6A13Q9NSD5 602 aa12.78□□□□□ -0.36
USB1-214ENST00000568848 NOP53Q9NZM5 478 aaKnown RBP12.78□□□□□ -0.36
USB1-214ENST00000568848 PRSS51A0A1B0GVH4 220 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 SAGP10523 405 aaPredicted RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 PNMTP11086 282 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 NAT2P11245 290 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 CBR1P16152 277 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 IL7RP16871 459 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 IL12AP29459 219 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 RPS5P46782 204 aaKnown RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 MPP2Q14168 576 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 C1orf140Q5VVS0 124 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 SERPINA11Q86U17 422 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 NATD1Q8N6N6 113 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 OR8J2Q8NGG1 315 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 GTF3AQ92664 365 aaKnown RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 PMM1Q92871 262 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 KTI12Q96EK9 354 aaPredicted RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 SLC6A7Q99884 636 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 PTDSS2Q9BVG9 487 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 SF3B5Q9BWJ5 86 aaKnown RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 TAPBPLQ9BX59 468 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 OBP2BQ9NPH6 170 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 POLE3Q9NRF9 147 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 ZNF275Q9NSD4 429 aaPredicted RBP12.77□□□□□ -0.37
USB1-214ENST00000568848 B3GAT1Q9P2W7 334 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
USB1-214ENST00000568848 TMEM89A2RUT3 159 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 B4DSR2 109 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 M0R3G1 203 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 CDC14BO60729 498 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 MSMBP08118 114 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 PATE4P0C8F1 98 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 NR2F1P10589 423 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 EPHA1P21709 976 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 GPR6P46095 362 aaPredicted RBP12.76□□□□□ -0.37
USB1-214ENST00000568848 UFM1P61960 85 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 GTDC1Q4AE62 458 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 SHQ1Q6PI26 577 aaKnown RBP12.76□□□□□ -0.37
USB1-214ENST00000568848 BOD1Q96IK1 185 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 DUX5Q96PT3 197 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 TSPAN32Q96QS1 320 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 EMC6Q9BV81 110 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 OR51B6Q9H340 312 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 KCNK9Q9NPC2 374 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 REV1Q9UBZ9 1251 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 SPEF1Q9Y4P9 236 aa12.76□□□□□ -0.37
USB1-214ENST00000568848 CDHR4A6H8M9 788 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 CCDC154A6NI56 674 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 PPIHO43447 177 aaKnown RBP12.75□□□□□ -0.37
USB1-214ENST00000568848 NPIPB7O75200 414 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 ZNF432O94892 652 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 AGR2O95994 175 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 HPRP00739 348 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 GAAP10253 952 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 CD79AP11912 226 aa12.75□□□□□ -0.37
USB1-214ENST00000568848 HLA-DOBP13765 273 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms