RNA–Protein interactions for RNA: ENST00000565393.2

TCF4-228, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 314 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-228ENST00000565393 ADAM21Q9UKJ8 722 aa5.6□□□□□ -1.51
TCF4-228ENST00000565393 CORO2BQ9UQ03 480 aa5.6□□□□□ -1.51
TCF4-228ENST00000565393 NDUFAF1Q9Y375 327 aa5.6□□□□□ -1.51
TCF4-228ENST00000565393 DOCK7Q96N67 2140 aa5.6□□□□□ -1.51
TCF4-228ENST00000565393 TRAV36DV7A0A075B6V5 113 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 TMEM229AB2RXF0 380 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 MS4A18H0YCH9 400 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 H7C417 338 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 M0QX08 132 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 M0R082 166 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 SERPINI2O75830 405 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 OR6A2O95222 327 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIST1H2ABP04908 130 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CD79AP11912 226 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 BMP2P12643 396 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 HOXB1P14653 301 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 CBR1P16152 277 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 GPX2P18283 190 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 USF1P22415 310 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 AHCYP23526 432 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 GRPRP30550 384 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 PDLIM4P50479 330 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 P2RY4P51582 365 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 RGS8P57771 180 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 SNRPD2P62316 118 aaKnown RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 LSM11P83369 360 aaKnown RBP eCLIP5.59□□□□□ -1.51
TCF4-228ENST00000565393 EGR4Q05215 589 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 PIGFQ07326 219 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 NPRL3Q12980 569 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 GGTLC2Q14390 218 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 OR1Q1Q15612 314 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CEACAM16Q2WEN9 425 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 MS4A18Q3C1V0 323 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CHRFAM7AQ494W8 412 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 IQCCQ4KMZ1 466 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 RUNDC3AQ59EK9 446 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 LRIF1Q5T3J3 769 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 PODNL1Q6PEZ8 512 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 DHRS4L2Q6PKH6 230 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 C5orf46Q6UWT4 87 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 DNM1P46Q6ZS02 220 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIST3H2AQ7L7L0 130 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 LINGO2Q7L985 606 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 RANBP3LQ86VV4 465 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIPK1Q86Z02 1210 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 UEVLDQ8IX04 471 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 MSRB3Q8IXL7 192 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 SMYD1Q8NB12 490 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIPK4Q8NE63 616 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 PIK3C3Q8NEB9 887 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 OR6N1Q8NGY5 312 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 ZNF417Q8TAU3 575 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 SLC26A7Q8TE54 656 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 NANOS1Q8WY41 292 aaKnown RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIST1H2ACQ93077 130 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 SLC35B4Q969S0 331 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 FOXN4Q96NZ1 517 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 ALKBH3Q96Q83 286 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 ZNF587Q96SQ5 575 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 EPYCQ99645 322 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 EMC6Q9BV81 110 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 KATNB1Q9BVA0 655 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 PTDSS2Q9BVG9 487 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 BEX2Q9BXY8 128 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 LINC00470Q9BZP3 86 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 C12orf10Q9HB07 376 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CRLF2Q9HC73 371 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 GPR35Q9HC97 309 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 B3GAT2Q9NPZ5 323 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CA10Q9NS85 328 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 VAPAQ9P0L0 249 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 LEF1Q9UJU2 399 aaPredicted RBP5.59□□□□□ -1.51
TCF4-228ENST00000565393 TRIM33Q9UPN9 1127 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 POFUT2Q9Y2G5 429 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 CCDC168Q8NDH2 2452 aa5.59□□□□□ -1.51
TCF4-228ENST00000565393 HIVEP1P15822 2718 aa5.59□□□□□ -1.52
TCF4-228ENST00000565393 A0A087WUJ7 227 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 ARPC4-TTLL3A0A0A6YYG9 625 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 LOC102725191A0A1B0GVB3 256 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 SLC35F4A4IF30 521 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 B9A039 149 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 FTCDNL1E5RQL4 147 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 C11orf98E9PRG8 122 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 RPL36A-HNRNPH2H7BZ11 118 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 ANGPT2O15123 496 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 AKAP8O43823 692 aaKnown RBP5.58□□□□□ -1.52
TCF4-228ENST00000565393 SEC14L2O76054 403 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 MFN2O95140 757 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 ERCC1P07992 297 aaPredicted RBP5.58□□□□□ -1.52
TCF4-228ENST00000565393 ARAFP10398 606 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 HLA-DOBP13765 273 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 SLC25A16P16260 332 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 NPR2P20594 1047 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 HTR2AP28223 471 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 ARR3P36575 388 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 MRPL19P49406 292 aaKnown RBP5.58□□□□□ -1.52
TCF4-228ENST00000565393 ATP4BP51164 291 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 CDH12P55289 794 aa5.58□□□□□ -1.52
TCF4-228ENST00000565393 SH3BGRP55822 239 aaPredicted RBP5.58□□□□□ -1.52
TCF4-228ENST00000565393 NAAAQ02083 359 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms