RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RNPS1Q15287 305 aaKnown RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 ZNF239Q16600 458 aaKnown RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 TTC33Q6PID6 262 aaPredicted RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 FAM214BQ7L5A3 538 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 OFCC1Q8IZS5 231 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 MFSD8Q8NHS3 518 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 ZNF300Q96RE9 604 aaPredicted RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 NAA11Q9BSU3 229 aaPredicted RBP13.91□□□□□ -0.18
USB1-208ENST00000563207 ZNF426Q9BUY5 554 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 TAPBPLQ9BX59 468 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 ANKRD19PQ9H560 264 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 UBTD1Q9HAC8 227 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 IL1RAPQ9NPH3 570 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 SLC7A8Q9UHI5 535 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 SLC7A7Q9UM01 511 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 A4GNTQ9UNA3 340 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 PROCRQ9UNN8 238 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 POMPQ9Y244 141 aa13.91□□□□□ -0.18
USB1-208ENST00000563207 PRR14LQ5THK1 2151 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 TRAV36DV7A0A075B6V5 113 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 TCRBV5S2A0A599 114 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 ZC3H12DA2A288 527 aaKnown RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 C16orf97H3BN30 126 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 FZD7O75084 574 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 LYPD3O95274 346 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 THY1P04216 161 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 CRYGSP22914 178 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 OR2B6P58173 313 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 NKX6-1P78426 367 aaPredicted RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 H3F3AP84243 136 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 EGR4Q05215 589 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 FLOT2Q14254 428 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 FAM98BQ52LJ0 330 aaKnown RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 FAM69AQ5T7M9 428 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 FCRLAQ7L513 359 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 PIWIL3Q7Z3Z3 882 aaKnown RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 TSPYL5Q86VY4 417 aaPredicted RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 CIARTQ8N365 385 aaPredicted RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 FAM86B1Q8N7N1 296 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 ROBO4Q8WZ75 1007 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 ZNF347Q96SE7 839 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 TACO1Q9BSH4 297 aaKnown RBP13.9□□□□□ -0.18
USB1-208ENST00000563207 FNDC11Q9BVV2 318 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 SRXN1Q9BYN0 137 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 NDUFAF4Q9P032 175 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 EDARQ9UNE0 448 aa13.9□□□□□ -0.18
USB1-208ENST00000563207 IGKV1D-42A0A075B6H8 117 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 LIPT2A6NK58 231 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 PLAUP00749 431 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 MT-ATP6P00846 226 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 FABP3P05413 133 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 IMPDH2P12268 514 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 SMIM11AP58511 58 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 VLDLRP98155 873 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 CHRNB3Q05901 458 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 TRAM2Q15035 370 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 PDK3Q15120 406 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 PAQR6Q6TCH4 344 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 STAC2Q6ZMT1 411 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 RNF128Q8TEB7 428 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 GMPPAQ96IJ6 420 aaPredicted RBP13.89□□□□□ -0.19
USB1-208ENST00000563207 PRSS27Q9BQR3 290 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 C12orf49Q9H741 205 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 PLSCR4Q9NRQ2 329 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 ELOVL5Q9NYP7 299 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 KLHL9Q9P2J3 617 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 CORINQ9Y5Q5 1042 aa13.89□□□□□ -0.19
USB1-208ENST00000563207 A0A1W2PRQ8 180 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 KLF4O43474 513 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 CYTIPO60759 359 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 SS18L1O75177 396 aaPredicted RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 PRSS23O95084 383 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 VAMP5O95183 116 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 GOSR1O95249 250 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 FPR1P21462 350 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 MAGEA2P43356 314 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 DGCR6Q14129 220 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 TSC22D1Q15714 1073 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 IQCCQ4KMZ1 466 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 RNF113BQ8IZP6 322 aaKnown RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 PIK3C3Q8NEB9 887 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 PIGXQ8TBF5 258 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 TMEM239Q8WW34 195 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 KTI12Q96EK9 354 aaPredicted RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 PTDSS2Q9BVG9 487 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 NMNAT1Q9HAN9 279 aaPredicted RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 BEX4Q9NWD9 120 aaPredicted RBP13.88□□□□□ -0.19
USB1-208ENST00000563207 ZNF226Q9NYT6 803 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 V9GYQ6 96 aa13.88□□□□□ -0.19
USB1-208ENST00000563207 DSCAMO60469 2012 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 FTCDNL1E5RQL4 147 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 J3KTA2 159 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 FFAR1O14842 300 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 SMAD9O15198 467 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 CIB2O75838 187 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 PLGP00747 810 aaPredicted RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 MT-ND1P03886 318 aa13.87□□□□□ -0.19
USB1-208ENST00000563207 H1F0P07305 194 aaKnown RBP13.87□□□□□ -0.19
USB1-208ENST00000563207 RAP2AP10114 183 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms