RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ZBED8Q8IZ13 594 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MTURNQ8N3F0 131 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ATP6V0D2Q8N8Y2 350 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 C8orf31Q8N9H6 132 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 GATSQ8NAP1 163 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 OR52H1Q8NGJ2 320 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 OR13C9Q8NGT0 318 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TYMSOSQ8TAI1 123 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 PLPPR1Q8TBJ4 325 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SETD7Q8WTS6 366 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 TCTEX1D2Q8WW35 142 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 HTR3CQ8WXA8 447 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 STMN2Q93045 179 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.84□□□□□ -1.95
SPG11-218ENST00000559754 NABP1Q96AH0 204 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ASB9Q96DX5 294 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 CERS2Q96G23 380 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TMEM80Q96HE8 168 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 CYYR1Q96J86 154 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 C9orf85Q96MD7 179 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 JSRP1Q96MG2 331 aaPredicted RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 OPALINQ96PE5 141 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 HSD17B14Q9BPX1 270 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 OCR1Q9BZK8 76 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 REEP4Q9H6H4 257 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SYNDIG1Q9H7V2 258 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 MYOZ2Q9NPC6 264 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 EXOSC3Q9NQT5 275 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 MLXQ9UH92 298 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 ANGPTL2Q9UKU9 493 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 TMCO1Q9UM00 188 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 COPS3Q9UNS2 423 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 SAMD4AQ9UPU9 718 aaKnown RBP2.84□□□□□ -1.95
SPG11-218ENST00000559754 FBXO7Q9Y3I1 522 aa2.84□□□□□ -1.95
SPG11-218ENST00000559754 HCFC1P51610 2035 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 CROCCQ5TZA2 2017 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 TCRBV9S1A1TA0A576 114 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ERICH2A1L162 156 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 SAGE2PA6NJ88 616 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 SIRPB1O00241 398 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NDUFAB1O14561 156 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 EIF3HO15372 352 aaKnown RBP eCLIP2.83□□□□□ -1.964e-6■■■■■ 29.2
SPG11-218ENST00000559754 ZNF749O43361 778 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 KDELR3O43731 214 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 PRKYO43930 277 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 LYPD3O95274 346 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 DCNP07585 359 aaKnown RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 H2AFZP0C0S5 128 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 SPAM1P38567 509 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NAA10P41227 235 aaPredicted RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 YAP1P46937 504 aaKnown RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 CX3CR1P49238 355 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 PRKXP51817 358 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 MAP3K7CLP57077 242 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 VLDLRP98155 873 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 SLAQ13239 276 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 RNF212Q495C1 297 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 RSBN1Q5VWQ0 802 aaPredicted RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 MEDAGQ5VYS4 303 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 FAM219BQ5XKK7 198 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 REEP3Q6NUK4 255 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ERICH5Q6P6B1 374 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 FAM199XQ6PEV8 388 aaPredicted RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 C19orf35Q6ZS72 473 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NIPA1Q7RTP0 329 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 HDDC2Q7Z4H3 204 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ST13P4Q8IZP2 240 aaPredicted RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 TPRX1Q8N7U7 411 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 OR2T33Q8NG76 320 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 OR52I1Q8NGK6 324 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 RHOXF1Q8NHV9 184 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 RFESDQ8TAC1 157 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NDNFQ8TB73 568 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 LRRC20Q8TCA0 184 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ASZ1Q8WWH4 475 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 TRUB1Q8WWH5 349 aaKnown RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 KIFAP3Q92845 792 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ZBED6CLQ96FA7 236 aaPredicted RBP2.83□□□□□ -1.96
SPG11-218ENST00000559754 RNF2Q99496 336 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 KCNS3Q9BQ31 491 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ROGDIQ9GZN7 287 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 LIME1Q9H400 295 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 MOB1AQ9H8S9 216 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 UGT1A10Q9HAW8 530 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 TMEM165Q9HC07 324 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 TREM1Q9NP99 234 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 IL26Q9NPH9 171 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 DYRK4Q9NR20 520 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NANSQ9NR45 359 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 ABCC13Q9NSE7 274 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 CHMP5Q9NZZ3 219 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 MGAT4AQ9UM21 535 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 CELA1Q9UNI1 258 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 NTNG1Q9Y2I2 539 aa2.83□□□□□ -1.96
SPG11-218ENST00000559754 IGHV3OR16-12A0A075B7B8 117 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 A0A087WWV3 80 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 NSG1A0A0A6YYJ2 146 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 TRBV9A0A0B4J1U6 114 aa2.82□□□□□ -1.96
SPG11-218ENST00000559754 LRRIQ3A6PVS8 624 aaPredicted RBP2.82□□□□□ -1.96
SPG11-218ENST00000559754 ARHGEF33A8MVX0 844 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms