RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 PRAMEF8Q5VWM4 474 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 PRAMEF7Q5VXH5 474 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 GPRIN3Q6ZVF9 776 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 KIF18AQ8NI77 898 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 SSMEM1Q8WWF3 244 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 FAM71F1Q96KD3 344 aaPredicted RBP8.19□□□□□ -1.1
SMAD3-211ENST00000559460 TAPBPLQ9BX59 468 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 LINC00470Q9BZP3 86 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 TRIM31Q9BZY9 425 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 NELFAQ9H3P2 528 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 NANOGQ9H9S0 305 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 SIRT5Q9NXA8 310 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 KIF17Q9P2E2 1029 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 IL20RAQ9UHF4 553 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 STK38LQ9Y2H1 464 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 JRKLQ9Y4A0 524 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 WNK2Q9Y3S1 2297 aa8.19□□□□□ -1.1
SMAD3-211ENST00000559460 TMED7-TICAM2A0A0A6YYA0 188 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SLC43A1O75387 559 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SUPT7LO94864 414 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SEC31AO94979 1220 aaKnown RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 VAMP5O95183 116 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 PLATP00750 562 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 GSTA2P09210 222 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SBK2P0C263 348 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 PPIAL4GP0DN37 164 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 IMPDH2P12268 514 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 FUT4P22083 530 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 STX2P32856 288 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 PTDSS1P48651 473 aaKnown RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 HTR6P50406 440 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF75DP51815 510 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 POLR2HP52434 150 aaKnown RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 DR1Q01658 176 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 CLCQ05315 142 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 NAB1Q13506 487 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 PDE7AQ13946 482 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 OR7A5Q15622 319 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 UAP1Q16222 522 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 FAM153CQ494X1 144 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 GPR157Q5UAW9 335 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 ANKRD26P1Q6NSI1 321 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 LRRN1Q6UXK5 716 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 BRD3OSQ6XYD6 125 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 Q6YL49 198 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 CYS1Q717R9 158 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 TMEM99Q8N816 258 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 ZIC4Q8N9L1 334 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 ICA1LQ8NDH6 482 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 ANKK1Q8NFD2 765 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 OR10S1Q8NGN2 331 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 FAM76AQ8TAV0 307 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SYNPRQ8TBG9 265 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 FAM120BQ96EK7 910 aaKnown RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 MS4A3Q96HJ5 214 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 EGLN1Q9GZT9 426 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 FBXL3Q9UKT7 428 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SLC35A3Q9Y2D2 325 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 TMED7Q9Y3B3 224 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 SOX21Q9Y651 276 aaPredicted RBP8.18□□□□□ -1.1
SMAD3-211ENST00000559460 CACNG2Q9Y698 323 aa8.18□□□□□ -1.1
SMAD3-211ENST00000559460 AQP7P3A6NL99 342 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 GOLGA6L6A8MZA4 724 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 C3orf84H3BNL1 204 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 TRAPPC2LH3BP13 241 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 RPL36A-HNRNPH2H7BZ11 118 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF208O43345 1280 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 GPR137BO60478 399 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 DNAJA2O60884 412 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 HLA-HP01893 362 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 LCKP06239 509 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF35P13682 527 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 UQCRBP14927 111 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 HSD17B3P37058 310 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 MAP2K6P52564 334 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 BPIFB3P59826 476 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 PIGFQ07326 219 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 LCP2Q13094 533 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 CAMK2DQ13557 499 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 CEACAM7Q14002 265 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 FXNQ16595 210 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 CEACAM16Q2WEN9 425 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ATP6AP1LQ52LC2 224 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 FAM219BQ5XKK7 198 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 GDPGP1Q6ZNW5 385 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 LINGO2Q7L985 606 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 C1orf174Q8IYL3 243 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ARFGAP2Q8N6H7 521 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 OR4S1Q8NGB4 309 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ACTRT1Q8TDG2 376 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 C11orf40Q8WZ69 217 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 PHF21AQ96BD5 680 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 UPRTQ96BW1 309 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 MRRFQ96E11 262 aaKnown RBP8.17□□□□□ -1.1
SMAD3-211ENST00000559460 MARS2Q96GW9 593 aaKnown RBP8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ZNF382Q96SR6 550 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 ADPRHL2Q9NX46 363 aa8.17□□□□□ -1.1
SMAD3-211ENST00000559460 POLR3KQ9Y2Y1 108 aaPredicted RBP8.17□□□□□ -1.1
SMAD3-211ENST00000559460 CMYA5Q8N3K9 4069 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms