RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 CAPZA2P47755 286 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 SELENOPP49908 381 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 SEC24CP53992 1094 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RPS23P62266 143 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 ETF1P62495 437 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 KCNJ10P78508 379 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 ARF1P84077 181 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 ROR2Q01974 943 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 MVKQ03426 396 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 C2orf54Q08AI8 447 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 OR7A5Q15622 319 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 MAPK14Q16539 360 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 GSTA3Q16772 222 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 FAM153CQ494X1 144 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 GALNTL6Q49A17 601 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RFTN2Q52LD8 501 aaPredicted RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 FBLN7Q53RD9 439 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 GKAP1Q5VSY0 366 aaPredicted RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 SAXO2Q658L1 398 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 CREB3L2Q70SY1 520 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 DOK3Q7L591 496 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 C6orf120Q7Z4R8 191 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 GSPT2Q8IYD1 628 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 FAM71CQ8NEG0 241 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 OR7A2PQ8NGA2 310 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 OR5D16Q8NGK9 328 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 MGARPQ8TDB4 240 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 XAGE5Q8WWM1 108 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 EDARADDQ8WWZ3 215 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 C22orf15Q8WYQ4 148 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RAB1CQ92928 201 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RAB8BQ92930 207 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 DVL3Q92997 716 aaPredicted RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 POP5Q969H6 163 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 YIPF5Q969M3 257 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 LRRC58Q96CX6 371 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 TIMD4Q96H15 378 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 ZNF350Q9GZX5 532 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 SERHL2Q9H4I8 314 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 SEC61A2Q9H9S3 476 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 NOX3Q9HBY0 568 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 EXOSC3Q9NQT5 275 aaKnown RBP4.44□□□□□ -1.7
SPG11-208ENST00000558155 DUSP13Q9UII6 198 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 NUP50Q9UKX7 468 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 RASD1Q9Y272 281 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 WDR45Q9Y484 360 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 ARHGAP32A7KAX9 2087 aa4.44□□□□□ -1.7
SPG11-208ENST00000558155 TGP01266 2768 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PPIAL4EA0A075B759 164 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 A0A087WUV0 522 aaPredicted RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 PPIAL4CA0A0B4J2A2 164 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 A0A1W2PPW3 197 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZC3H12DA2A288 527 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 A8MVM7 634 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PPIAL4DF5H284 164 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CLDN34H7C241 214 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 M0QZ24 198 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 FAAHO00519 579 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 TIMM23O14925 209 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 AZIN1O14977 448 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 LSM1O15116 133 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 SCAMP2O15127 329 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 CDC14BO60729 498 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 SLC43A1O75387 559 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 RP2O75695 350 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZNF432O94892 652 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 RNASE1P07998 156 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 PPIAL4FP0DN26 164 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 OR12D1P0DN82 309 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 NAT2P11245 290 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZNF35P13682 527 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZNF43P17038 809 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PRPS1L1P21108 318 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 LSP1P33241 339 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 SOAT1P35610 550 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CRYBB2P43320 205 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 MTNR1AP48039 350 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ATP4BP51164 291 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CLDN17P56750 224 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DNAJB13P59910 316 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 RPS26P62854 115 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 RPL38P63173 70 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 HBA1P69905 142 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 GALK2Q01415 458 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 SLC7A5Q01650 507 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 DOC2BQ14184 412 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 GNA13Q14344 377 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 MOGQ16653 247 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PCGF3Q3KNV8 242 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 GPAT3Q53EU6 434 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 ZNF362Q5T0B9 420 aaPredicted RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 AVPI1Q5T686 147 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PRAMEF8Q5VWM4 474 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 PRAMEF7Q5VXH5 474 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 LIPMQ5VYY2 423 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 CLEC6AQ6EIG7 209 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 TYW3Q6IPR3 259 aaKnown RBP4.43□□□□□ -1.7
SPG11-208ENST00000558155 TMEM154Q6P9G4 183 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 EMBQ6PCB8 327 aa4.43□□□□□ -1.7
SPG11-208ENST00000558155 C16orf87Q6PH81 154 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms