RNA–Protein interactions for RNA: ENST00000556669.1

LINC02299-201, Transcript of long intergenic non-protein coding RNA 2299, humanhuman

TSL 5 BASIC

Gene LINC02299, Length 430 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02299-201ENST00000556669 PCGF2P35227 344 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 CDH11P55287 796 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 CDH12P55289 794 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 ATP5J2P56134 94 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 CLDN17P56750 224 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 NCALDP61601 193 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 RPS4XP62701 263 aaKnown RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 KLF10Q13118 480 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 NRF1Q16656 503 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 TRMT5Q32P41 509 aaKnown RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 RABL3Q5HYI8 236 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 NIPAL3Q6P499 406 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 TSPYL5Q86VY4 417 aaPredicted RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 RBM45Q8IUH3 476 aaKnown RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 C1orf162Q8NEQ5 155 aaPredicted RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 OR6T1Q8NGN1 323 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF417Q8TAU3 575 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 TAMM41Q96BW9 452 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 ALKBH3Q96Q83 286 aaPredicted RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF587Q96SQ5 575 aaPredicted RBP13.25□□□□□ -0.29
LINC02299-201ENST00000556669 SLC13A4Q9UKG4 626 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 USP22Q9UPT9 525 aa13.25□□□□□ -0.29
LINC02299-201ENST00000556669 E7EQL1 145 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 LRRN3E7EW58 273 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 MS4A18H0YCH9 400 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 AIM2O14862 343 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 OR2T1O43869 369 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF432O94892 652 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 LYPD3O95274 346 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 HPRP00739 348 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 BGLAPP02818 100 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 THY1P04216 161 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF43P17038 809 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 PTAFRP25105 342 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 CDKN1AP38936 164 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 TGFBR3Q03167 851 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 VMACQ2NL98 169 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 MS4A18Q3C1V0 323 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 HIKESHIQ53FT3 197 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 REP15Q6BDI9 236 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 C5orf46Q6UWT4 87 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 TMEM108Q6UXF1 575 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 LINC00114Q6XXX2 140 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 B3GLCTQ6Y288 498 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 Q71RC1 249 aaPredicted RBP13.24□□□□□ -0.29
LINC02299-201ENST00000556669 BIVMQ86UB2 503 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 CALHM3Q86XJ0 350 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 C17orf78Q8N4C9 275 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 LRRC58Q96CX6 371 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 BOD1Q96IK1 185 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 COX4I2Q96KJ9 171 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 OXGR1Q96P68 337 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 MCHR1Q99705 422 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 TRAF4Q9BUZ4 470 aaPredicted RBP13.24□□□□□ -0.29
LINC02299-201ENST00000556669 CCDC134Q9H6E4 229 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 B3GALT5Q9Y2C3 310 aa13.24□□□□□ -0.29
LINC02299-201ENST00000556669 ZANQ9Y493 2812 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 LOC100653049A0A140TA62 436 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 KRT33AO76009 404 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 KRT34O76011 436 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 C8BP07358 591 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 GTF2E2P29084 291 aaKnown RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 CYLC2Q14093 348 aaPredicted RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 SLC22A25Q6T423 547 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 KLHL17Q6TDP4 642 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 WDR88Q6ZMY6 472 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 H1FNTQ75WM6 255 aaPredicted RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 PATL1Q86TB9 770 aaKnown RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 DTX2Q86UW9 622 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 RANBP3LQ86VV4 465 aaPredicted RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 SNX32Q86XE0 403 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 WDFY1Q8IWB7 410 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 VANGL1Q8TAA9 524 aaPredicted RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 SLC41A3Q96GZ6 507 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 MOGAT1Q96PD6 335 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 LINC00470Q9BZP3 86 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 HEATR1Q9H583 2144 aaKnown RBP13.23□□□□□ -0.29
LINC02299-201ENST00000556669 EVA1AQ9H8M9 152 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 SELENONQ9NZV5 590 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 MGAT4BQ9UQ53 548 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 AMDHD2Q9Y303 409 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 CSPG4Q6UVK1 2322 aa13.23□□□□□ -0.29
LINC02299-201ENST00000556669 LOC102725191A0A1B0GVB3 256 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 CPSF4LA6NMK7 179 aaKnown RBP13.22□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF587BE7ETH6 402 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 MRASO14807 208 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 SMAD7O15105 426 aaKnown RBP13.22□□□□□ -0.29
LINC02299-201ENST00000556669 TRAF3IP2O43734 574 aaPredicted RBP13.22□□□□□ -0.29
LINC02299-201ENST00000556669 FMO6PO60774 539 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 NDUFS7O75251 213 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 PRPS1P60891 318 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 TBRG1Q3YBR2 411 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 MMEL1Q495T6 779 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 COQ5Q5HYK3 327 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 ENTPD8Q5MY95 495 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 SWT1Q5T5J6 900 aaKnown RBP13.22□□□□□ -0.29
LINC02299-201ENST00000556669 ZNF613Q6PF04 617 aa13.22□□□□□ -0.29
LINC02299-201ENST00000556669 NHLRC1Q6VVB1 395 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms