RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 CSMD2Q7Z408 3487 aa10.7□□□□□ -0.7
SRP54-206ENST00000555317 FAM221AA4D161 298 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ZNF587BE7ETH6 402 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 SHOX2O60902 331 aaPredicted RBP10.69□□□□□ -0.7
SRP54-206ENST00000555317 RAD51DO75771 328 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 OR5F1O95221 314 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 SERPINA1P01009 418 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 UMPSP11172 480 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 COX5AP20674 150 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 IGHV1-2P23083 117 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 DNASE1P24855 282 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 P2RY4P51582 365 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 FOXD4Q12950 439 aaPredicted RBP10.69□□□□□ -0.7
SRP54-206ENST00000555317 SAMD4BQ5PRF9 694 aaKnown RBP10.69□□□□□ -0.7
SRP54-206ENST00000555317 OR7E24Q6IFN5 339 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 NIPAL3Q6P499 406 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 CREB3L2Q70SY1 520 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 UEVLDQ8IX04 471 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 PGAM4Q8N0Y7 254 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ADPRHL1Q8NDY3 354 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 OXGR1Q96P68 337 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ZNF385AQ96PM9 386 aaKnown RBP10.69□□□□□ -0.7
SRP54-206ENST00000555317 SLC19A3Q9BZV2 496 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ARL8BQ9NVJ2 186 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 RPS6KA6Q9UK32 745 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ITGB1BP2Q9UKP3 347 aa10.69□□□□□ -0.7
SRP54-206ENST00000555317 ENO4A6NNW6 628 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 SLC43A1O75387 559 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 CH25HO95992 272 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 BGLAPP02818 100 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 THBDP07204 575 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 NCK1P16333 377 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 AHCYP23526 432 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 EDNRAP25101 427 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 RBM34P42696 430 aaKnown RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 CLDN17P56750 224 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 POU3F1Q03052 451 aaPredicted RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 PUDPQ08623 228 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 KRT72Q14CN4 511 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 PPA1Q15181 289 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 IFI44LQ53G44 452 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 C9orf135Q5VTT2 229 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 KLHL24Q6TFL4 600 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 VTCN1Q7Z7D3 282 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 P2RY8Q86VZ1 359 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 CYP4Z1Q86W10 505 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 KDM8Q8N371 416 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 RNF148Q8N7C7 305 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 ZNF433Q8N7K0 673 aaPredicted RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 OR5J2Q8NH18 312 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 NRGNQ92686 78 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 HSH2DQ96JZ2 352 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 PRRC1Q96M27 445 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 FNDC11Q9BVV2 318 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 ESRP2Q9H6T0 727 aaKnown RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 FKRPQ9H9S5 495 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 NANSQ9NR45 359 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 MRPL39Q9NYK5 338 aaKnown RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 GMPR2Q9P2T1 348 aaKnown RBP10.68□□□□□ -0.7
SRP54-206ENST00000555317 SEC14L4Q9UDX3 406 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 EGFL7Q9UHF1 273 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 RIMS3Q9UJD0 308 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 ADAM21Q9UKJ8 722 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 RCE1Q9Y256 329 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 NOX1Q9Y5S8 564 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 CADP27708 2225 aa10.68□□□□□ -0.7
SRP54-206ENST00000555317 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 DEFB108AA8MXU0 73 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 SERPINI2O75830 405 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ADORA3P0DMS8 318 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 THRBP10828 461 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 CDH2P19022 906 aaPredicted RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 TCN1P20061 433 aaPredicted RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 MPGP29372 298 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 SELENOPP49908 381 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 SLC25A3Q00325 362 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ST3GAL3Q11203 375 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 PIN1Q13526 163 aaPredicted RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 KEAP1Q14145 624 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 TAB1Q15750 504 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 TIMM23BQ5SRD1 257 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 TSPO2Q5TGU0 170 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 GLYATQ6IB77 296 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 HMBOX1Q6NT76 420 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 LINC00114Q6XXX2 140 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 WDR88Q6ZMY6 472 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 CBLL1Q75N03 491 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 NANOGNBQ7Z5D8 188 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 EPHX4Q8IUS5 362 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 DEFB107AQ8IZN7 70 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 GPR137CQ8N3F9 429 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ZIC4Q8N9L1 334 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 TMEM239Q8WW34 195 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 NINJ1Q92982 152 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 PLPPR2Q96GM1 343 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 HS6ST2Q96MM7 605 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 MOGAT1Q96PD6 335 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 ALKBH3Q96Q83 286 aaPredicted RBP10.67□□□□□ -0.7
SRP54-206ENST00000555317 UBTD1Q9HAC8 227 aa10.67□□□□□ -0.7
SRP54-206ENST00000555317 B3GAT2Q9NPZ5 323 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms