RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 ACOT7O00154 380 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 GOSR2O14653 212 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 GPRIN2O60269 458 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 BRINP1O60477 761 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 CTNSO60931 367 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 ADAM23O75077 832 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 CD3GP09693 182 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 SNRPBP14678 240 aaKnown RBP5.34□□□□□ -1.56
VPS50-220ENST00000544910 GIFP27352 417 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 TRHRP34981 398 aaPredicted RBP5.34□□□□□ -1.56
VPS50-220ENST00000544910 EMDP50402 254 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 ACTBP60709 375 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 DCAF7P61962 342 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 ACTG1P63261 375 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 MPEG1Q2M385 716 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 ZMAT1Q5H9K5 638 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 TMEM205Q6UW68 189 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 GSG1LQ6UXU4 331 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 VASH1Q7L8A9 365 aaPredicted RBP5.34□□□□□ -1.56
VPS50-220ENST00000544910 OR2L13Q8N349 312 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 OR4Q3Q8NH05 313 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 GPR148Q8TDV2 347 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 CPNE2Q96FN4 548 aaPredicted RBP5.34□□□□□ -1.56
VPS50-220ENST00000544910 LURAP1Q96LR2 239 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 RBP7Q96R05 134 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 TEAD3Q99594 435 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 SEC61A2Q9H9S3 476 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 CUTCQ9NTM9 273 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 SERGEFQ9UGK8 458 aa5.34□□□□□ -1.56
VPS50-220ENST00000544910 GPR55Q9Y2T6 319 aaPredicted RBP5.34□□□□□ -1.56
VPS50-220ENST00000544910 POM121BA6NF01 834 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 A6NIZ1 184 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 EFCAB7A8K855 629 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 LINC01565O15544 149 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 SELENOFO60613 162 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 UTS2O95399 124 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 INHBBP09529 407 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 HOXB9P17482 250 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 CD53P19397 219 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 MAOBP27338 520 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 HTR3AP46098 478 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 DAP3P51398 398 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 RAP1BP61224 184 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 RAP2BP61225 183 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 RRAS2P62070 204 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 RAP1AP62834 184 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ATXN7L3Q14CW9 347 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 AGERQ15109 404 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 YIF1BQ5BJH7 314 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PHF19Q5T6S3 580 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 OVCH1Q7RTY7 1134 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 UBE3DQ7Z6J8 389 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ZNF584Q8IVC4 421 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ZNF101Q8IZC7 436 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TMEM185AQ8NFB2 350 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CCL4L1Q8NHW4 92 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 LGALS14Q8TCE9 139 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 GIMAP1Q8WWP7 306 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PNPLA2Q96AD5 504 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 WDFY2Q96P53 400 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 NMNAT3Q96T66 252 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 DHRS9Q9BPW9 319 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 INIPQ9NRY2 104 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 DKKL1Q9UK85 242 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TEX13DA0A0J9YY54 714 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 CCDC85CA6NKD9 419 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ZNF264O43296 627 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 UBL3O95164 117 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 HOXC4P09017 264 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 ARSBP15848 533 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CRABP1P29762 137 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 CTHP32929 405 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ETV6P41212 452 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TPBGQ13641 420 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 BAK1Q16611 211 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PCGF3Q3KNV8 242 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ZNF628Q5EBL2 1059 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 GPR139Q6DWJ6 353 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TCEAL6Q6IPX3 200 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 SIRT6Q8N6T7 355 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 BCORP1Q8N888 145 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 OR4D11Q8NGI4 311 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ASB17Q8WXJ9 295 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 RBPMSQ93062 196 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 ISG20L2Q9H9L3 353 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 ASF1BQ9NVP2 202 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 ZFC3H1O60293 1989 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 SCGB1D2O95969 90 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 HCKP08631 526 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 TPT1P13693 172 aaKnown RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 DRD5P21918 477 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 DRD3P35462 400 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 PXNP49023 591 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 ARRB1P49407 418 aaPredicted RBP5.33□□□□□ -1.56
VPS50-220ENST00000544910 GNMTQ14749 295 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 AVPI1Q5T686 147 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 MED25Q71SY5 747 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 OR14A16Q8NHC5 309 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 SLC22A8Q8TCC7 542 aa5.33□□□□□ -1.56
VPS50-220ENST00000544910 SP7Q8TDD2 431 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms