RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 SLC25A3Q00325 362 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 NFYCQ13952 458 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 CYP51A1Q16850 503 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 RUNDC3AQ59EK9 446 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 PAQR6Q6TCH4 344 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 HIPK4Q8NE63 616 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 BHLHE22Q8NFJ8 381 aaPredicted RBP13.56□□□□□ -0.24
CSF1R-209ENST00000543093 PROX1Q92786 737 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 C3orf49Q96BT1 292 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 ANKRD27Q96NW4 1050 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 ZNF607Q96SK3 696 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 TAPBPLQ9BX59 468 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 AMBRA1Q9C0C7 1298 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 SLC7A10Q9NS82 523 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 RPS6KB2Q9UBS0 482 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 LPAR3Q9UBY5 353 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 SLC9A8Q9Y2E8 581 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 AMDHD2Q9Y303 409 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 FLVCR1Q9Y5Y0 555 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 PMF1-BGLAPU3KQ54 211 aa13.56□□□□□ -0.24
CSF1R-209ENST00000543093 PRORSD1PA6NEY8 169 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 ATP6V1G2-DDX39BF2Z307 99 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 SERPINB7O75635 380 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 VIMP08670 466 aaKnown RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 CSF3P09919 207 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 USF1P22415 310 aaPredicted RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 AQP1P29972 269 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 APOBEC3AP31941 199 aaPredicted RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 MTPNP58546 118 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 NCALDP61601 193 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 H3F3AP84243 136 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 BNIP2Q12982 314 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 CEACAM7Q14002 265 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 OR7A5Q15622 319 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 OTUD3Q5T2D3 398 aaPredicted RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 TSPO2Q5TGU0 170 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 DHRS4L2Q6PKH6 230 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 RETREG3Q86VR2 466 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 C17orf78Q8N4C9 275 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 ARIH2OSQ8N7S6 290 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 C11orf65Q8NCR3 313 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 C1orf162Q8NEQ5 155 aaPredicted RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 CGREF1Q99674 301 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 SHARPINQ9H0F6 387 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 MED4Q9NPJ6 270 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 PARPBPQ9NWS1 579 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 TESQ9UGI8 421 aaKnown RBP13.55□□□□□ -0.24
CSF1R-209ENST00000543093 SLC13A4Q9UKG4 626 aa13.55□□□□□ -0.24
CSF1R-209ENST00000543093 ARFGEF3Q5TH69 2177 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 LIPT2A6NK58 231 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 TMEM229AB2RXF0 380 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 AHSA1O95433 338 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 F12P00748 615 aaPredicted RBP13.54□□□□□ -0.24
CSF1R-209ENST00000543093 ARFIP2P53365 341 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 LSM11P83369 360 aaKnown RBP eCLIP13.54□□□□□ -0.24
CSF1R-209ENST00000543093 HOXC5Q00444 222 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 TGFBR3Q03167 851 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 KRTAP24-1Q3LI83 254 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 C1orf140Q5VVS0 124 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 ARMC8Q8IUR7 673 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 FBXO17Q96EF6 278 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 ADPRHL2Q9NX46 363 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 MALRD1Q5VYJ5 2156 aa13.54□□□□□ -0.24
CSF1R-209ENST00000543093 AQP7P3A6NL99 342 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 LMX1BO60663 402 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 AKR7A3O95154 331 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 CDH2P19022 906 aaPredicted RBP13.53□□□□□ -0.24
CSF1R-209ENST00000543093 GTF2E2P29084 291 aaKnown RBP13.53□□□□□ -0.24
CSF1R-209ENST00000543093 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
CSF1R-209ENST00000543093 PRPS1P60891 318 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 GUCY1A3Q02108 690 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 RBBP4Q09028 425 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 SELPLGQ14242 412 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 GGTLC2Q14390 218 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 SLC17A1Q14916 467 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 ADRM1Q16186 407 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 TRMT5Q32P41 509 aaKnown RBP13.53□□□□□ -0.24
CSF1R-209ENST00000543093 CGB2Q6NT52 195 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 KLHL24Q6TFL4 600 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 C6orf89Q6UWU4 347 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 PTOV1Q86YD1 416 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 SLC30A8Q8IWU4 369 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 STK35Q8TDR2 534 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 CCDC134Q9H6E4 229 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 C12orf10Q9HB07 376 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 MOKQ9UQ07 419 aa13.53□□□□□ -0.24
CSF1R-209ENST00000543093 TPST1O60507 370 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 WNT11O96014 354 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 IGFBP5P24593 272 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 HTR2AP28223 471 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 MPGP29372 298 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 GZMKP49863 264 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 PDLIM4P50479 330 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 SF3A3Q12874 501 aaKnown RBP eCLIP13.52□□□□□ -0.25
CSF1R-209ENST00000543093 MAPRE2Q15555 327 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 SWI5Q1ZZU3 235 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 MST1LQ2TV78 715 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 MMEL1Q495T6 779 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 GLIPR1L2Q4G1C9 344 aa13.52□□□□□ -0.25
CSF1R-209ENST00000543093 HIKESHIQ53FT3 197 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms