RNA–Protein interactions for RNA: ENST00000542199.1

MRPS35-204, Transcript of mitochondrial ribosomal protein S35, humanhuman

TSL 3

Gene MRPS35, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-204ENST00000542199 DDX39BQ13838 428 aaKnown RBP7.22□□□□□ -1.25
MRPS35-204ENST00000542199 MELKQ14680 651 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 HYAL4Q2M3T9 481 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 PIGGQ5H8A4 983 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 C8orf74Q6P047 294 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 OPN5Q6U736 354 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 DGAT2L6Q6ZPD8 337 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 GOLGA7Q7Z5G4 137 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 OR4N5Q8IXE1 308 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 C9orf40Q8IXQ3 194 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 ST13P4Q8IZP2 240 aaPredicted RBP7.22□□□□□ -1.25
MRPS35-204ENST00000542199 L3MBTL4Q8NA19 623 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 FAM173AQ9BQD7 235 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 NEURL2Q9BR09 285 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 CENPKQ9BS16 269 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 LRRC1Q9BTT6 524 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 CCDC106Q9BWC9 280 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 TTTY12Q9BZ98 90 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 MMP27Q9H306 513 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 DENND2DQ9H6A0 471 aaPredicted RBP7.22□□□□□ -1.25
MRPS35-204ENST00000542199 RPF2Q9H7B2 306 aaKnown RBP7.22□□□□□ -1.25
MRPS35-204ENST00000542199 ACTR8Q9H981 624 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 IL1RL2Q9HB29 575 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 NINJ2Q9NZG7 142 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 COPS7AQ9UBW8 275 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 PHF11Q9UIL8 331 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 ASB4Q9Y574 426 aa7.22□□□□□ -1.25
MRPS35-204ENST00000542199 WASHC1A8K0Z3 465 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 FAM166BA8MTA8 275 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 G3V3Y1 287 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 OR7A17O14581 309 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TO15178 435 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 EEDO75530 441 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 PRKRAO75569 313 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 PDE9AO76083 593 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 SEMA3DO95025 777 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 SIX3O95343 332 aaPredicted RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 NADKO95544 446 aaPredicted RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 GPR75O95800 540 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CLPSP04118 112 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 SNRNP70P08621 437 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CCL3P10147 92 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TNNI3P19429 210 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CNR1P21554 472 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 ELAVL4P26378 380 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TLX1P31314 330 aaPredicted RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 GABRA5P31644 462 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 PHBP35232 272 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 RAP1GDS1P52306 607 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CKAP4Q07065 602 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TFF3Q07654 80 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 ASPHQ12797 758 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 ZNF791Q3KP31 576 aaPredicted RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TECRLQ5HYJ1 363 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 NDUFAF5Q5TEU4 345 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 KLC3Q6P597 504 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 SLC22A16Q86VW1 577 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 RPRMLQ8N4K4 120 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 TMEM251Q8N6I4 163 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 PAQR8Q8TEZ7 354 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CA5BP1Q8WTZ4 195 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 PPWD1Q96BP3 646 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 RBM18Q96H35 190 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 ART5Q96L15 291 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 LURAP1Q96LR2 239 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 DEFB127Q9H1M4 99 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 LYARQ9NX58 379 aaKnown RBP7.21□□□□□ -1.26
MRPS35-204ENST00000542199 RHCGQ9UBD6 479 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 RNF11Q9Y3C5 154 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 ANGPTL3Q9Y5C1 460 aa7.21□□□□□ -1.26
MRPS35-204ENST00000542199 CLDN9O95484 217 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 AIFM1O95831 613 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 P04436 131 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 RBP1P09455 135 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 FAM58BPP0C7Q3 252 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 SLC35E2P0CK97 266 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 CHRNB4P30926 498 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 MAGEA5P43359 124 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 DNASE1L1P49184 302 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 PHEXP78562 749 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 PLGLB1Q02325 96 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 HNRNPA0Q13151 305 aaKnown RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 EBPQ15125 230 aaKnown RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 UAP1Q16222 522 aaPredicted RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 WHAMMP3Q1A5X7 153 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 SPSB3Q6PJ21 355 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 FAM47EQ6ZV65 393 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 NUDT13Q86X67 352 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 DND1Q8IYX4 353 aaKnown RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 MMGT1Q8N4V1 131 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 OR52B6Q8NGF0 335 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 LILRB4Q8NHJ6 448 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 SLC22A8Q8TCC7 542 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 SPACA9Q96E40 222 aaPredicted RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 C14orf79Q96F83 325 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 DUX5Q96PT3 197 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 PELOQ9BRX2 385 aaKnown RBP7.2□□□□□ -1.26
MRPS35-204ENST00000542199 NTMT1Q9BV86 223 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 WWTR1Q9GZV5 400 aa7.2□□□□□ -1.26
MRPS35-204ENST00000542199 TSPYL1Q9H0U9 437 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms