RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 TPMTP51580 245 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 PSG6Q00889 435 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 TMEM44Q2T9K0 475 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 DEFB110Q30KQ9 67 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 OR52L1Q8NGH7 329 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 ASB12Q8WXK4 309 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 S1PR5Q9H228 398 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 ADGRL4Q9HBW9 690 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 HRASLSQ9HDD0 168 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 SCP2D1Q9UJQ7 156 aa11.52□□□□□ -0.57
SFSWAP-208ENST00000539506 IGF2P01344 180 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 S1PR1P21453 382 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 HNRNPA2B1P22626 353 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RIN1Q13671 783 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 STK11Q15831 433 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 BEX5Q5H9J7 111 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 TMEM184AQ6ZMB5 413 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 Q6ZSR6 202 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 GID4Q8IVV7 300 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RNF113BQ8IZP6 322 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ESX1Q8N693 406 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 OR52R1Q8NGF1 315 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 OR52E2Q8NGJ4 325 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 WNT2BQ93097 391 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 PGLYRP3Q96LB9 341 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 MNTQ99583 582 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ARL6Q9H0F7 186 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 KCNK15Q9H427 330 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 PCDHGA5Q9Y5G8 931 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ASCC3Q8N3C0 2202 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 WDFY3Q8IZQ1 3526 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 hCG_1807616A0A1W2PRN6 198 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ANXA2P2A6NMY6 339 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 FLRT2O43155 660 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RAD1O60671 282 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 NAGAP17050 411 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ACAA2P42765 397 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 CCR9P51686 369 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 LINC00303Q3SY05 128 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 AMZ1Q400G9 498 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 BTN2A1Q7KYR7 527 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 OR13H1Q8NG92 308 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 OR6K6Q8NGW6 343 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 MARC2Q969Z3 335 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 AHCYL2Q96HN2 611 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 STACQ99469 402 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 TSPAN10Q9H1Z9 355 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 TTYH1Q9H313 450 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 NOX3Q9HBY0 568 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 NOX4Q9NPH5 578 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 HRASLS2Q9NWW9 162 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 CPNE7Q9UBL6 633 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 ADAM18Q9Y3Q7 739 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 SLCO1B1Q9Y6L6 691 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 A0A0B4J2E0 115 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 TRBV2A0A0J9YWF9 115 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 A0A1B0GX12 115 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RDH16O75452 317 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 SBK2P0C263 348 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 FBXO45P0C2W1 286 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 CTRB1P17538 263 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 EDNRAP25101 427 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 GDI2P50395 445 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 CTRB2Q6GPI1 263 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RNF44Q7L0R7 432 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 GPAT4Q86UL3 456 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 FAM98AQ8NCA5 519 aaKnown RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 OR8S1Q8NH09 359 aa11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 RERGQ96A58 199 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 UBL7Q96S82 380 aaPredicted RBP11.51□□□□□ -0.57
SFSWAP-208ENST00000539506 A0A1B0GWA3 101 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 URADA6NGE7 173 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 GMFGO60234 142 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 AKR1C2P52895 323 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 DEFA5Q01523 94 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 BDH1Q02338 343 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 AKR1C1Q04828 323 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 NDUFAF6Q330K2 333 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 GPALPP1Q8IXQ4 340 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 ARHGEF39Q8N4T4 335 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 CSNK1A1LQ8N752 337 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 OR9A4Q8NGU2 314 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 C1orf216Q8TAB5 229 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 SNX33Q8WV41 574 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 NARS2Q96I59 477 aaKnown RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 PPA2Q9H2U2 334 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 SAV1Q9H4B6 383 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 CACYBPQ9HB71 228 aaKnown RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 POMT2Q9UKY4 750 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 SDK1Q7Z5N4 2213 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 A0A1B0GVI7 797 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 SLC22A23A1A5C7 686 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 UBL3O95164 117 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 BMP8BP34820 402 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 UBE2IP63279 158 aaKnown RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 KLF9Q13886 244 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 BMP8AQ7Z5Y6 402 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 OR56B4Q8NH76 319 aa11.5□□□□□ -0.57
SFSWAP-208ENST00000539506 SLC37A2Q8TED4 501 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms