RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 KLHL24Q6TFL4 600 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 H1FNTQ75WM6 255 aaPredicted RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 YTHDF3Q7Z739 585 aaKnown RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 DTX2Q86UW9 622 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 EPHX4Q8IUS5 362 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 SCAIQ8N9R8 606 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 OR52N5Q8NH56 324 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 OR10A6Q8NH74 314 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 SMAP2Q8WU79 429 aaPredicted RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 TAAR8Q969N4 342 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 SLC25A36Q96CQ1 311 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 OXGR1Q96P68 337 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 TMEM43Q9BTV4 400 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 MOV10Q9HCE1 1003 aaKnown RBP10.15□□□□□ -0.78
RTN3-209ENST00000538995 SAR1AQ9NR31 198 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 B3GAT1Q9P2W7 334 aa10.15□□□□□ -0.78
RTN3-209ENST00000538995 CADP27708 2225 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 M0QX08 132 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 M0R082 166 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 MRASO14807 208 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 CHP2O43745 196 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 TPST2O60704 377 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 KRT33AO76009 404 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 WNT11O96014 354 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 SOD3P08294 240 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 INHBBP09529 407 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 CD40P25942 277 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 GRPRP30550 384 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 SELENOPP49908 381 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 GZMMP51124 257 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 PRPS1P60891 318 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 GUCY1A3Q02108 690 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 DUSP7Q16829 419 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 VMACQ2NL98 169 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 MMEL1Q495T6 779 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 REP15Q6BDI9 236 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 NANOGP8Q6NSW7 305 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 NIPAL3Q6P499 406 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 ERICH5Q6P6B1 374 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 CCDC80Q76M96 950 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 LSRQ86X29 649 aaPredicted RBP10.14□□□□□ -0.79
RTN3-209ENST00000538995 WDR31Q8NA23 367 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 SMYD1Q8NB12 490 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 PCYOX1LQ8NBM8 494 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 GPR32P1Q8NGA4 272 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 ZNF417Q8TAU3 575 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 MAGEE2Q8TD90 523 aaPredicted RBP10.14□□□□□ -0.79
RTN3-209ENST00000538995 LRRC58Q96CX6 371 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 SLC41A3Q96GZ6 507 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 COX4I2Q96KJ9 171 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 Q96MF0 132 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 ALKBH3Q96Q83 286 aaPredicted RBP10.14□□□□□ -0.79
RTN3-209ENST00000538995 ZNF587Q96SQ5 575 aaPredicted RBP10.14□□□□□ -0.79
RTN3-209ENST00000538995 BDH2Q9BUT1 245 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 PCDHAC1Q9H158 963 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 NANOGQ9H9S0 305 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 CISD1Q9NZ45 108 aaKnown RBP10.14□□□□□ -0.79
RTN3-209ENST00000538995 LAMP3Q9UQV4 416 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 CAPN7Q9Y6W3 813 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 DSCAMO60469 2012 aa10.14□□□□□ -0.79
RTN3-209ENST00000538995 NIPBLQ6KC79 2804 aaeCLIP10.13□□□□□ -0.79
RTN3-209ENST00000538995 RPL36A-HNRNPH2H7BZ11 118 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 M0R3H8 397 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 SLC43A1O75387 559 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ZNF432O94892 652 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 MT-ATP6P00846 226 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 OPN1SWP03999 348 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 CD247P20963 164 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ZNF83P51522 516 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 CDH12P55289 794 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ATP5J2P56134 94 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 CLDN17P56750 224 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 C1DQ13901 141 aaKnown RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 VEZF1Q14119 521 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 PGGHGQ32M88 737 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 RABL3Q5HYI8 236 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 C9orf135Q5VTT2 229 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 SNX32Q86XE0 403 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 CALHM3Q86XJ0 350 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 DEPDC4Q8N2C3 294 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 OR6T1Q8NGN1 323 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 OR1K1Q8NGR3 316 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 SLC26A7Q8TE54 656 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 NEUROG1Q92886 237 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 GTPBP3Q969Y2 492 aaKnown RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 TAMM41Q96BW9 452 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 TRMT61AQ96FX7 289 aaKnown RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 MPP4Q96JB8 637 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 MCHR1Q99705 422 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ECSITQ9BQ95 431 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 WFDC6Q9BQY6 131 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 TRAF4Q9BUZ4 470 aaPredicted RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 PRR14Q9BWN1 585 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ASPNQ9BXN1 380 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 SLC19A3Q9BZV2 496 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 ALG2Q9H553 416 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 GID8Q9NWU2 228 aa10.13□□□□□ -0.79
RTN3-209ENST00000538995 MRPL39Q9NYK5 338 aaKnown RBP10.13□□□□□ -0.79
RTN3-209ENST00000538995 SEC14L4Q9UDX3 406 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms