RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 MRPL48Q96GC5 212 aaKnown RBP17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 CFHR5Q9BXR6 569 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 APMAPQ9HDC9 416 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 ERVK-19Q9WJR5 959 aa17.06■□□□□ 0.32
SFSWAP-207ENST00000538548 SPINT1O43278 529 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 CCL5P13501 91 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC6A6P31641 620 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 C4orf46Q504U0 113 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 LDLRAD3Q86YD5 345 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 OR2L13Q8N349 312 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 LINC01555Q8NAE3 123 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 OR1M1Q8NGA1 313 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 RPS4Y2Q8TD47 263 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 STK35Q8TDR2 534 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC25A28Q96A46 364 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF707Q96C28 371 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 MEPEQ9NQ76 525 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 C2orf42Q9NWW7 574 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 MOKQ9UQ07 419 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 KANTRA0A1W2PQU2 76 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 LAMP2P13473 410 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 CERS1P27544 350 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 ITPKBP27987 946 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 RFC3P40938 356 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 PRDX1Q06830 199 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 DND1Q8IYX4 353 aaKnown RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 KCNRGQ8N5I3 272 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 OR14A16Q8NHC5 309 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 C6orf106Q9H6K1 298 aaPredicted RBP17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 C14orf105Q9NVL8 296 aa17.05■□□□□ 0.32
SFSWAP-207ENST00000538548 ABHD14A-ACY1A0A1B0GW23 586 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 TMEM218A2RU14 115 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 RAB19A4D1S5 217 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 NRG2O14511 850 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 BCL6P41182 706 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 PRMT2P55345 433 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 ZNF345Q14585 488 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 JMJD6Q6NYC1 403 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 OR52E2Q8NGJ4 325 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 OR51L1Q8NGJ5 315 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 LRFN5Q96NI6 719 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 GAREM1Q9H706 876 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 EPHA6Q9UF33 1036 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 SERTAD3Q9UJW9 196 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 REV3LO60673 3130 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 TP53BP1Q12888 1972 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 A0A1W2PRU2 124 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 XRCC3O43542 346 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 PAK4O96013 591 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 TMIGD3P0DMS9 266 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 MAGEB1P43366 347 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 LUMP51884 338 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 MRPL2Q5T653 305 aaKnown RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 STAC2Q6ZMT1 411 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 ARMC10Q8N2F6 343 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 OR7G2Q8NG99 324 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 OR4D10Q8NGI6 311 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 RGP1Q92546 391 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 TNFRSF13CQ96RJ3 184 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 SDF2Q99470 211 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 SLITRK2Q9H156 845 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 ALX4Q9H161 411 aaPredicted RBP17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 WDR13Q9H1Z4 485 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 CCL26Q9Y258 94 aa17.04■□□□□ 0.32
SFSWAP-207ENST00000538548 SYNDIG1LA6NDD5 238 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 PPIAP62937 165 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 DPTQ07507 201 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SERTAD2Q14140 314 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 OR2W3Q7Z3T1 314 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC43A2Q8N370 569 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SDR9C7Q8NEX9 313 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 OR2L5Q8NG80 312 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 OR51S1Q8NGJ8 323 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC46A2Q9BY10 475 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 TMEM185BQ9H7F4 350 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 TCF7L1Q9HCS4 588 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SLC23A2Q9UGH3 650 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 CHD9Q3L8U1 2897 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 BCL2L11O43521 198 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 OR2F2O95006 317 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 ZFPL1O95159 310 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 CD8AP01732 235 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 DBIP07108 87 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 EPCAMP16422 314 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 UBE2IP63279 158 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 OR2F1Q13607 317 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 PAN3Q58A45 887 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 LY6G6FQ5SQ64 297 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 SPAG16Q8N0X2 631 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 DUSP19Q8WTR2 217 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 EXO5Q9H790 373 aa17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 USP36Q9P275 1121 aaKnown RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 GPN3Q9UHW5 284 aaPredicted RBP17.03■□□□□ 0.32
SFSWAP-207ENST00000538548 AKAIN1P0CW23 69 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 C6P13671 934 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 NID1P14543 1247 aa17.02■□□□□ 0.32
SFSWAP-207ENST00000538548 LAG3P18627 525 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms