RNA–Protein interactions for RNA: ENST00000534284.1

CYCSP28-201, Transcript of cytochrome c, somatic pseudogene 28, humanhuman

BASIC

Gene CYCSP28, Length 321 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYCSP28-201ENST00000534284 MYL9P24844 172 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TLX1P31314 330 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TRIM23P36406 574 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SOX3P41225 446 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CCR2P41597 374 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SLC1A3P43003 542 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 NR4A2P43354 598 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CDH11P55287 796 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RGS8P57771 180 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RPS15AP62244 130 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 BTG1P62324 171 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ACTC1P68032 377 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ACTA1P68133 377 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CSNK1G2P78368 415 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 DEFB103AP81534 67 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CDK3Q00526 305 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RGS1Q08116 209 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 HNRNPA0Q13151 305 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 FGFBP1Q14512 234 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 KRT33BQ14525 404 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CDK10Q15131 360 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SF3A2Q15428 464 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZIC1Q15915 447 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RPE65Q16518 533 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 COL28A1Q2UY09 1125 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GPAT3Q53EU6 434 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PYDC2Q56P42 97 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZNF628Q5EBL2 1059 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ATAD3CQ5T2N8 411 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 LIPKQ5VXJ0 399 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 THOC7Q6I9Y2 204 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ADNP2Q6IQ32 1131 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SLC48A1Q6P1K1 146 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZCCHC12Q6PEW1 402 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZNF474Q6S9Z5 364 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 WASH2PQ6VEQ5 465 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GLDNQ6ZMI3 551 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PLEKHM3Q6ZWE6 761 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MBOAT2Q6ZWT7 520 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 C16orf62Q7Z3J2 963 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GRASPQ7Z6J2 395 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 NRARPQ7Z6K4 114 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZER1Q7Z7L7 766 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TBC1D26Q86UD7 250 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 NOXA1Q86UR1 476 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 IQCHQ86VS3 1027 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 WDR5BQ86VZ2 330 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 LRRC28Q86X40 367 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 NRROSQ86YC3 692 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PLCZ1Q86YW0 608 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SNX29P2Q8IUI4 249 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CDK20Q8IZL9 346 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 HDDC3Q8N4P3 179 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PAQR4Q8N4S7 273 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MFSD9Q8NBP5 474 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZNF740Q8NDX6 193 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 FAM83FQ8NEG4 500 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 DUSP18Q8NEJ0 188 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 OR2T33Q8NG76 320 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 OR52N4Q8NGI2 321 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 OR5AR1Q8NGP9 310 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 VANGL1Q8TAA9 524 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PHOSPHO2Q8TCD6 241 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GPR151Q8TDV0 419 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZFPM2Q8WW38 1151 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CAPSLQ8WWF8 208 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 OIT3Q8WWZ8 545 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SLC7A6Q92536 515 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PHYHIPQ92561 330 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ATOH1Q92858 354 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 FGF11Q92914 225 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 DVL3Q92997 716 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 CREB3L1Q96BA8 519 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TCEAL4Q96EI5 215 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MS4A4EQ96PG1 132 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ABHD1Q96SE0 405 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SDHCQ99643 169 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 C7orf50Q9BRJ6 194 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 SRSF8Q9BRL6 282 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 DPH7Q9BTV6 452 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 KATNB1Q9BVA0 655 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MTIF3Q9H2K0 278 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 LINC00597Q9H2U6 94 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GLIPR2Q9H4G4 154 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MTHFD2LQ9H903 347 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TRPV4Q9HBA0 871 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RANGRFQ9HD47 186 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 MRPS30Q9NP92 439 aaKnown RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 ZDHHC4Q9NPG8 344 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 IL20Q9NYY1 176 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 STMN3Q9NZ72 180 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 GDE1Q9NZC3 331 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 OR6C2Q9NZP2 312 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 EMC3Q9P0I2 261 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 AKAP7Q9P0M2 348 aaPredicted RBP4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 PTGFRNQ9P2B2 879 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 RHCGQ9UBD6 479 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 FBXW2Q9UKT8 454 aa4.3□□□□□ -1.72
CYCSP28-201ENST00000534284 TBC1D24Q9ULP9 559 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms