RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 SLC35F3Q8IY50 421 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 PIANPQ8IYJ0 282 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2AK2Q8NG84 335 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR2G2Q8NGZ5 317 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 FBXO17Q96EF6 278 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ADAT1Q9BUB4 502 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC17A9Q9BYT1 436 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 TUBG2Q9NRH3 451 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 NTMQ9P121 344 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 GOLT1BQ9Y3E0 138 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SPTBN4Q9H254 2564 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 C6orf47O95873 294 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SOD1P00441 154 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 PNPP00491 289 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 F10P00742 488 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 HBQ1P09105 142 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC35G4P0C7Q5 338 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LAMP1P11279 417 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 TIMP2P16035 220 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SDC1P18827 310 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 COL9A1P20849 921 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 FGF9P31371 208 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 AKT2P31751 481 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 CYCSP99999 105 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LRIF1Q5T3J3 769 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ZDHHC20Q5W0Z9 365 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 Q6ZNB5 142 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 HIST2H3AQ71DI3 136 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LRRTM1Q86UE6 522 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LRRC56Q8IYG6 542 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 FAM98AQ8NCA5 519 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR4F15Q8NGB8 312 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ARRDC2Q8TBH0 407 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 KLHDC7BQ96G42 594 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 POM121Q96HA1 1249 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 PEX11GQ96HA9 241 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MRGPRX1Q96LB2 322 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF354BQ96LW1 612 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ALG8Q9BVK2 526 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LGR4Q9BXB1 951 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SOHLH2Q9NX45 425 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 LHX3Q9UBR4 397 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 WDR45Q9Y484 360 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SVILO95425 2214 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A0B4J2A0 478 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 A0A0G2JN53 185 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR52A4PA6NMU1 304 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SYT5O00445 386 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR10H2O60403 315 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 CYB5AP00167 134 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 HPXP02790 462 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 CSF1P09603 554 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 GPX2P18283 190 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 DDTP30046 118 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 VAMP2P63027 116 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MAT1AQ00266 395 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MAPK14Q16539 360 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ODF4Q2M2E3 257 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 C18orf21Q32NC0 220 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 TMEM205Q6UW68 189 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ACOT7LQ6ZUV0 252 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF627Q7L945 461 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SMIM15Q7Z3B0 74 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 TGIF2LXQ8IUE1 241 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 EID2Q8N6I1 236 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 OR5W2Q8NH69 310 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SLC39A7Q92504 469 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ISG20Q96AZ6 181 aaKnown RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 FOXRED1Q96CU9 486 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 WDR89Q96FK6 387 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SEC22AQ96IW7 307 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF582Q96NG8 517 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 C20orf24Q9BUV8 137 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MEPEQ9NQ76 525 aaPredicted RBP6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 TM7SF3Q9NS93 570 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 C19orf12Q9NSK7 152 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 MAN2C1Q9NTJ4 1040 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 SHPKQ9UHJ6 478 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 NPFFR2Q9Y5X5 522 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 AUP1Q9Y679 476 aa6.29□□□□□ -1.4
TGFBR3-209ENST00000532540 NUP214P35658 2090 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PSMD9O00233 223 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ZNF208O43345 1280 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RNF13O43567 381 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PRICKLE3O43900 615 aaPredicted RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RDH16O75452 317 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 IGLV3-27P01718 113 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 AMY2AP04746 511 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CTSLP07711 333 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PRR35P0CG20 571 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 APEHP13798 732 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CXCL2P19875 107 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 ACVR2AP27037 513 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 RFX3P48380 749 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 CAMLGP49069 296 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 MRPL19P49406 292 aaKnown RBP6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 P2RY4P51582 365 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PPP2CBP62714 309 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 PPP2CAP67775 309 aa6.28□□□□□ -1.4
TGFBR3-209ENST00000532540 SKP2Q13309 424 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms