RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CDH16O75309 829 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 HSPB1P04792 205 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 TNNI1P19237 187 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 PRKAR2BP31323 418 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 BTDP43251 543 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 SYKP43405 635 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 RAP1BP61224 184 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 ARHGAP19Q14CB8 494 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 KIAA0040Q15053 153 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 PPP1R7Q15435 360 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 MRPL23Q16540 153 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 SPANXN2Q5MJ10 180 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 SAMD4BQ5PRF9 694 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 LY6G6FQ5SQ64 297 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 C1orf100Q5SVJ3 147 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 C9orf129Q5T035 196 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 ZNF658Q5TYW1 1059 aaPredicted RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 SLC8B1Q6J4K2 584 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 ZNF774Q6NX45 483 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 TMEM220Q6QAJ8 160 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 CLEC2AQ6UVW9 174 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 TFAP2EQ6VUC0 442 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 LRRC74BQ6ZQY2 392 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 RFLNAQ6ZTI6 216 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 GDPD3Q7L5L3 318 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 HSD17B13Q7Z5P4 300 aaPredicted RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 ZNF546Q86UE3 836 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 CEND1Q8N111 149 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 MS4A15Q8N5U1 240 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 B3GNT7Q8NFL0 401 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 OR7G2Q8NG99 324 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 ACMSDQ8TDX5 336 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 OR1E3Q8WZA6 343 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 NRGNQ92686 78 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 ITCHQ96J02 903 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 IFT74Q96LB3 600 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 CHP1Q99653 195 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 RIOK1Q9BRS2 568 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 CENPKQ9BS16 269 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 CNPY3Q9BT09 278 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 SELENOIQ9C0D9 397 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 RACGAP1Q9H0H5 632 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 GEMIN7Q9H840 131 aaKnown RBP2.16□□□□□ -2.06
CD44-234ENST00000531873 GIN1Q9NXP7 522 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 TREM2Q9NZC2 230 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 VANGL2Q9ULK5 521 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 MMP17Q9ULZ9 603 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 THSD7BQ9C0I4 1608 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 CDHR2Q9BYE9 1310 aa2.16□□□□□ -2.06
CD44-234ENST00000531873 NINLQ9Y2I6 1382 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 GOLGA6L7A0A1B0GV03 622 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 RBMY1BA6NDE4 496 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 RBMY1EA6NEQ0 496 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 CCDC182A6NF36 153 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 EPOPA6NHQ4 379 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 ZFP92A6NM28 416 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 H0YIV9 168 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 WRBO00258 174 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 GOSR2O14653 212 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 PHOX2AO14813 284 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 CHST1O43916 411 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 ZNF780AO75290 641 aaPredicted RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 IGHV2-5P01817 119 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 FTH1P02794 183 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 FGF1P05230 155 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 RBMY1DP0C7P1 496 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 RBMY1A1P0DJD3 496 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 OR8G3PP0DMU2 310 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 KIR2DS4P43632 304 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 SLC26A2P50443 739 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 GPM6AP51674 278 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 DIO3P55073 304 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 ZNF45Q02386 682 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 ACVR1Q04771 509 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 GPNMBQ14956 572 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 C1orf146Q5VVC0 180 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 OLFML2AQ68BL7 652 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 TIGD3Q6B0B8 471 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 TRIM40Q6P9F5 258 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 BZW1Q7L1Q6 419 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 TMEM252Q8N6L7 170 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 CEP112Q8N8E3 955 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 NKAPP1Q8N9T2 125 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 BBS1Q8NFJ9 593 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 OR4C5Q8NGB2 326 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 OR10G3Q8NGC4 313 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 OR51S1Q8NGJ8 323 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 PYROXD1Q8WU10 500 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 C7orf33Q8WU49 177 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 STARD8Q92502 1023 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 KIFAP3Q92845 792 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 FGF14Q92915 247 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 SLC38A4Q969I6 547 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 MCUR1Q96AQ8 359 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 SMIM14Q96QK8 99 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 OR8B4Q96RC9 309 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 TGS1Q96RS0 853 aaKnown RBP2.15□□□□□ -2.07
CD44-234ENST00000531873 P2RY13Q9BPV8 354 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 C11orf70Q9BRQ4 267 aa2.15□□□□□ -2.07
CD44-234ENST00000531873 MTG1Q9BT17 334 aaPredicted RBP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms