RNA–Protein interactions for RNA: ENST00000527469.1

CAPN1-209, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-209ENST00000527469 C9orf135Q5VTT2 229 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 C8orf82Q6P1X6 216 aaPredicted RBP11.82□□□□□ -0.52
CAPN1-209ENST00000527469 NIPAL3Q6P499 406 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 C16orf89Q6UX73 402 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 CREB3L2Q70SY1 520 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 P2RY8Q86VZ1 359 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 UEVLDQ8IX04 471 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 KDM8Q8N371 416 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 SCAIQ8N9R8 606 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 GEMIN6Q8WXD5 167 aaKnown RBP11.82□□□□□ -0.52
CAPN1-209ENST00000527469 NRGNQ92686 78 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 OXGR1Q96P68 337 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF385AQ96PM9 386 aaKnown RBP11.82□□□□□ -0.52
CAPN1-209ENST00000527469 SLC19A3Q9BZV2 496 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 ESRP2Q9H6T0 727 aaKnown RBP11.82□□□□□ -0.52
CAPN1-209ENST00000527469 TAS2R16Q9NYV7 291 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 GMPR2Q9P2T1 348 aaKnown RBP11.82□□□□□ -0.52
CAPN1-209ENST00000527469 MALT1Q9UDY8 824 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 RPS6KA6Q9UK32 745 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 CSMD1Q96PZ7 3565 aa11.82□□□□□ -0.52
CAPN1-209ENST00000527469 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-209ENST00000527469 DEFB108AA8MXU0 73 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 SLC43A1O75387 559 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 SERPINI2O75830 405 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 CH25HO95992 272 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 THBDP07204 575 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 NCK1P16333 377 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 CDH2P19022 906 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-209ENST00000527469 COX5AP20674 150 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 AHCYP23526 432 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 P2RY4P51582 365 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 PIN1Q13526 163 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-209ENST00000527469 PPA1Q15181 289 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 TAB1Q15750 504 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 IFI44LQ53G44 452 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 SAMD4BQ5PRF9 694 aaKnown RBP11.81□□□□□ -0.52
CAPN1-209ENST00000527469 TSPO2Q5TGU0 170 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 OR7E24Q6IFN5 339 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 KLHL24Q6TFL4 600 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 CYP4Z1Q86W10 505 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 RNF148Q8N7C7 305 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF433Q8N7K0 673 aaPredicted RBP11.81□□□□□ -0.52
CAPN1-209ENST00000527469 ZIC4Q8N9L1 334 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 ADPRHL1Q8NDY3 354 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 PLPPR2Q96GM1 343 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 HSH2DQ96JZ2 352 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 UBTD1Q9HAC8 227 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 NANSQ9NR45 359 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 SLC7A10Q9NS82 523 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 ARL8BQ9NVJ2 186 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 ABCD2Q9UBJ2 740 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 SEC14L4Q9UDX3 406 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 EGFL7Q9UHF1 273 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 RIMS3Q9UJD0 308 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 NOX1Q9Y5S8 564 aa11.81□□□□□ -0.52
CAPN1-209ENST00000527469 OR5H1A6NKK0 313 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 ZNF726A6NNF4 738 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 BGLAPP02818 100 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 RAF1P04049 648 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 ADORA3P0DMS8 318 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 THRBP10828 461 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 TCN1P20061 433 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 NTF4P34130 210 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 RBM34P42696 430 aaKnown RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 SELENOPP49908 381 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 POU3F1Q03052 451 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 PUDPQ08623 228 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 ST3GAL3Q11203 375 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 KRT72Q14CN4 511 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 TIMM23BQ5SRD1 257 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 HMBOX1Q6NT76 420 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 LINC00114Q6XXX2 140 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 C22orf34Q6ZV56 151 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 NANOGNBQ7Z5D8 188 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 VTCN1Q7Z7D3 282 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 EPHX4Q8IUS5 362 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 GPR137CQ8N3F9 429 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 PIK3C3Q8NEB9 887 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 OR5J2Q8NH18 312 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 NINJ1Q92982 152 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 PRRC1Q96M27 445 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 HS6ST2Q96MM7 605 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 MOGAT1Q96PD6 335 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 FKRPQ9H9S5 495 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 MRPL39Q9NYK5 338 aaKnown RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 ST6GALNAC2Q9UJ37 374 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 ADAM21Q9UKJ8 722 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 RCE1Q9Y256 329 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 PLEKHA6Q9Y2H5 1048 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 MED31Q9Y3C7 131 aa11.8□□□□□ -0.52
CAPN1-209ENST00000527469 FAM32AQ9Y421 112 aaKnown RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 MAP1AP78559 2803 aaPredicted RBP11.8□□□□□ -0.52
CAPN1-209ENST00000527469 LRRN3E7EW58 273 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 C11orf98E9PRG8 122 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 CLOCKO15516 846 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 RNF13O43567 381 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 THY1P04216 161 aa11.79□□□□□ -0.52
CAPN1-209ENST00000527469 CD3EP07766 207 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms