RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TEX37Q96LM6 180 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 PLA2G12AQ9BZM1 189 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 ROPN1BQ9BZX4 212 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 OCEL1Q9H607 264 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 ROPN1Q9HAT0 212 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 DYNLRB1Q9NP97 96 aa13.93□□□□□ -0.18
PTPRU-210ENST00000527027 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.93□□□□□ -0.18
PTPRU-210ENST00000527027 A0A096LPI6 279 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 A0A0A6YYJ9 748 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 IGHV2OR16-5A0A0B4J2B6 119 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 SLCO1B7G3V0H7 640 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 SERPINE1P05121 402 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 IGFBP1P08833 259 aaPredicted RBP13.92□□□□□ -0.18
PTPRU-210ENST00000527027 ADRA2AP08913 450 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 CFPP27918 469 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 ARR3P36575 388 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 CDKN2CP42773 168 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 RPL14P50914 215 aaKnown RBP13.92□□□□□ -0.18
PTPRU-210ENST00000527027 IFFO1Q0D2I5 559 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 LRRC74AQ0VAA2 488 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 TRIP10Q15642 601 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 MAPK11Q15759 364 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 LIN52Q52LA3 116 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF836Q6ZNA1 936 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 KDM8Q8N371 416 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 MFSD8Q8NHS3 518 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 STK35Q8TDR2 534 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 CKAP2Q8WWK9 683 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 RCE1Q9Y256 329 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 RAP2CQ9Y3L5 183 aa13.92□□□□□ -0.18
PTPRU-210ENST00000527027 WDR91A4D1P6 747 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 LYNX1G3V0Z9 82 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 SLC43A1O75387 559 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF432O94892 652 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 AHSA1O95433 338 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 KRT75O95678 551 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 GSNP06396 782 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 LYNX1P0DP58 116 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 PRG2P13727 222 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF43P17038 809 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 NCF2P19878 526 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-210ENST00000527027 NME5P56597 212 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CLDN17P56750 224 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 UFM1P61960 85 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 POU3F1Q03052 451 aaPredicted RBP13.91□□□□□ -0.18
PTPRU-210ENST00000527027 DAG1Q14118 895 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CHI3L2Q15782 390 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 RINLQ6ZS11 566 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CCDC36Q8IYA8 594 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CDK20Q8IZL9 346 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CLIP4Q8N3C7 705 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 PNPT1Q8TCS8 783 aaKnown RBP13.91□□□□□ -0.18
PTPRU-210ENST00000527027 ZFAND2BQ8WV99 257 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 SLC25A36Q96CQ1 311 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 OR52E6Q96RD3 313 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 NUF2Q9BZD4 464 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 C20orf27Q9GZN8 174 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 GPR35Q9HC97 309 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF232Q9UNY5 417 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 CMAHPQ9Y471 501 aa13.91□□□□□ -0.18
PTPRU-210ENST00000527027 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 B4DSR2 109 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 FTCDNL1E5RQL4 147 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 VENTXO95231 258 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 PNMTP11086 282 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 H2AFXP16104 143 aaPredicted RBP13.9□□□□□ -0.18
PTPRU-210ENST00000527027 IL12AP29459 219 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 NPRL3Q12980 569 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 CCNIQ14094 377 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 LARS2Q15031 903 aaKnown RBP13.9□□□□□ -0.18
PTPRU-210ENST00000527027 BEND6Q5SZJ8 279 aaPredicted RBP13.9□□□□□ -0.18
PTPRU-210ENST00000527027 OGFOD2Q6N063 350 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 DEF8Q6ZN54 512 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 GLCCI1Q86VQ1 547 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 KIRREL3Q8IZU9 778 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 GPR137CQ8N3F9 429 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 OXGR1Q96P68 337 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 SORT1Q99523 831 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 NOX3Q9HBY0 568 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 CRLF2Q9HC73 371 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 CALML5Q9NZT1 146 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 P2RX2Q9UBL9 471 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF443Q9Y2A4 671 aaPredicted RBP13.9□□□□□ -0.18
PTPRU-210ENST00000527027 MEGF8Q7Z7M0 2845 aa13.9□□□□□ -0.18
PTPRU-210ENST00000527027 ZNF503-AS2A6NEH8 195 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 BIRC5O15392 142 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 SPRY1O43609 319 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-210ENST00000527027 NR4A1P22736 598 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 SLC1A6P48664 564 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 EVX1P49640 407 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 CRISP3P54108 245 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 IL1RL1Q01638 556 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 SNTB2Q13425 540 aaKnown RBP13.89□□□□□ -0.19
PTPRU-210ENST00000527027 C1DQ13901 141 aaKnown RBP13.89□□□□□ -0.19
PTPRU-210ENST00000527027 CEACAM16Q2WEN9 425 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 RNF220Q5VTB9 566 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 MDP1Q86V88 176 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF837Q96EG3 531 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-210ENST00000527027 PTDSS2Q9BVG9 487 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 SPATA9Q9BWV2 254 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms