RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 SERPINF1P36955 418 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CLDN17P56750 224 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 ROR2Q01974 943 aaKnown RBP16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CYB5R2Q6BCY4 276 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 EPGNQ6UW88 154 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 PHC2Q8IXK0 858 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 MSRB3Q8IXL7 192 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 MAGEE2Q8TD90 523 aaPredicted RBP16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 KCNK17Q96T54 332 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 KATNB1Q9BVA0 655 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 REPIN1Q9BWE0 567 aaKnown RBP16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 PRR14Q9BWN1 585 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CACYBPQ9HB71 228 aaKnown RBP16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 TMBIM4Q9HC24 238 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 CA10Q9NS85 328 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 SLAMF8Q9P0V8 285 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 B3GAT1Q9P2W7 334 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 USH1CQ9Y6N9 552 aa16.34■□□□□ 0.21
PTP4A3-206ENST00000524028 OR6C65A6NJZ3 312 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 FZD7O75084 574 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 IGLV1-44P01699 117 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 CSF3P09919 207 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 FAM157CP0CG43 387 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF16P17020 682 aaPredicted RBP16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 HTR2AP28223 471 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 UBE2NP61088 152 aaKnown RBP16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 NAAAQ02083 359 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 ADIPOQQ15848 244 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 C6orf89Q6UWU4 347 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 MYPOPQ86VE0 399 aaPredicted RBP16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 FUNDC1Q8IVP5 155 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 ANKS4BQ8N8V4 417 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 BBS10Q8TAM1 723 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 TAAR8Q969N4 342 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 SLC35B4Q969S0 331 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF837Q96EG3 531 aaPredicted RBP16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 TMEM160Q9NX00 188 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 CDC42EP3Q9UKI2 254 aa16.33■□□□□ 0.2
PTP4A3-206ENST00000524028 IGKV1D-42A0A075B6H8 117 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF503-AS2A6NEH8 195 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 RPL36A-HNRNPH2H7BZ11 118 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 CRYAAP02489 173 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 CELA3BP08861 270 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF43P17038 809 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 LSM11P83369 360 aaKnown RBP eCLIP16.32■□□□□ 0.26e-6■■□□□ 14.5
PTP4A3-206ENST00000524028 ARF1P84077 181 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 HGFACQ04756 655 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 FADDQ13158 208 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 VHLLQ6RSH7 139 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 ARIH2OSQ8N7S6 290 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 NFKBIDQ8NI38 313 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 OXGR1Q96P68 337 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 HEATR1Q9H583 2144 aaKnown RBP16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 SLC52A3Q9NQ40 469 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 RCE1Q9Y256 329 aa16.32■□□□□ 0.2
PTP4A3-206ENST00000524028 A0A1B0GWA3 101 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 M0R082 166 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 TPST1O60507 370 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 IGKV3-15P01624 115 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 OR4A8P0C604 315 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 ETS2P15036 469 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 PRKAR1BP31321 381 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 NR4A2P43354 598 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 MRPL19P49406 292 aaKnown RBP16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 PDLIM4P50479 330 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 SNRPD2P62316 118 aaKnown RBP16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 GGTLC2Q14390 218 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 C3orf36Q3SXR2 165 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 LSMEM1Q8N8F7 131 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF417Q8TAU3 575 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 FOXN4Q96NZ1 517 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF317Q96PQ6 595 aaPredicted RBP16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 ZNF587Q96SQ5 575 aaPredicted RBP16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 VRK1Q99986 396 aaPredicted RBP16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 KCNS3Q9BQ31 491 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 PLK3Q9H4B4 646 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 RAD21L1Q9H4I0 556 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 C12orf10Q9HB07 376 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 GPR35Q9HC97 309 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 RPS6KB2Q9UBS0 482 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 FKBP7Q9Y680 259 aa16.31■□□□□ 0.2
PTP4A3-206ENST00000524028 ARFGEF3Q5TH69 2177 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 YLPM1P49750 1951 aaKnown RBP16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 B9A039 149 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 C5orf58C9J3I9 102 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 PHF1O43189 567 aaPredicted RBP16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 SLC43A1O75387 559 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 ARAFP10398 606 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 HOXB1P14653 301 aaPredicted RBP16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 CBLP22681 906 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 PAX7P23759 505 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 GTF2E2P29084 291 aaKnown RBP16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 GRPRP30550 384 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 SH3BGRP55822 239 aaPredicted RBP16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 EFNB3Q15768 340 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 PAGE3Q5JUK9 113 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 PHYHD1Q5SRE7 291 aa16.3■□□□□ 0.2
PTP4A3-206ENST00000524028 FAM69AQ5T7M9 428 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms