RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 C6orf89Q6UWU4 347 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 LINGO2Q7L985 606 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ANKK1Q8NFD2 765 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 MAGEE2Q8TD90 523 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 NANOS1Q8WY41 292 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 PROX1Q92786 737 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 KTI12Q96EK9 354 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 OXGR1Q96P68 337 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 ALKBH3Q96Q83 286 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 KATNB1Q9BVA0 655 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 PTDSS2Q9BVG9 487 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 C12orf10Q9HB07 376 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 MOV10Q9HCE1 1003 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 TCF7L2Q9NQB0 619 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC25A37Q9NYZ2 338 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 RCE1Q9Y256 329 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 STAB1Q9NY15 2570 aa10.25□□□□□ -0.77
CTNNA1-237ENST00000523275 A0A096LPE4 126 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 A0A1W2PPZ6 126 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 NR5A2O00482 541 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 POLR3GO15318 223 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC43A1O75387 559 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 LY6HO94772 140 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 ZNF432O94892 652 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 HOXB9P17482 250 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 USF1P22415 310 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 IDH3AP50213 366 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 SH3BGRP55822 239 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 SNRPD2P62316 118 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 TUBA1BP68363 451 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 TUBA4AP68366 448 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 ARF1P84077 181 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 ROR2Q01974 943 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 C1DQ13901 141 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 C3orf36Q3SXR2 165 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 BEND6Q5SZJ8 279 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 LRIF1Q5T3J3 769 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 C6orf52Q5T4I8 152 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 GCNT6Q5T4J0 391 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 CYB5R2Q6BCY4 276 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 REEP3Q6NUK4 255 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 C5orf46Q6UWT4 87 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 TUBA1AQ71U36 451 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 NET1Q7Z628 596 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 KRT73Q86Y46 540 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 FUNDC1Q8IVP5 155 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 FAM169BQ8N8A8 192 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 LSMEM1Q8N8F7 131 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 NFKBIDQ8NI38 313 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 DNAJA4Q8WW22 397 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 TAAR8Q969N4 342 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 C7orf26Q96N11 449 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 KCNK17Q96T54 332 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 RSPO3Q9BXY4 272 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 CA10Q9NS85 328 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 SLAMF8Q9P0V8 285 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 CRNNQ9UBG3 495 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 MXRA5Q9NR99 2828 aa10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 FBN1P35555 2871 aaKnown RBP10.24□□□□□ -0.77
CTNNA1-237ENST00000523275 TRAV36DV7A0A075B6V5 113 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 LOC102725191A0A1B0GVB3 256 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 A0A1B0GWA3 101 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 B9A039 149 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 RPL36A-HNRNPH2H7BZ11 118 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 AIM2O14862 343 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 FZD7O75084 574 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 OR4A8P0C604 315 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 CECR9P0C854 216 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 ARAFP10398 606 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 PPIBP23284 216 aaKnown RBP10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 PDLIM4P50479 330 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 LSM11P83369 360 aaKnown RBP eCLIP10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 CDK6Q00534 326 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 NAAAQ02083 359 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 ADIPOQQ15848 244 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 FAM69AQ5T7M9 428 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 ULK3Q6PHR2 472 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 DHRS4L2Q6PKH6 230 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 H1FNTQ75WM6 255 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC46A3Q7Z3Q1 461 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 MSRB3Q8IXL7 192 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 GPR137CQ8N3F9 429 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 OR4F15Q8NGB8 312 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 SLC38A4Q969I6 547 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 SPDL1Q96EA4 605 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 VRK1Q99986 396 aaPredicted RBP10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 CCDC28BQ9BUN5 200 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 SPATA5L1Q9BVQ7 753 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 PRR14Q9BWN1 585 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 GPR35Q9HC97 309 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 B3GAT1Q9P2W7 334 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 SEC14L4Q9UDX3 406 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 CDC42EP3Q9UKI2 254 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 FKBP7Q9Y680 259 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 GMEB1Q9Y692 573 aa10.23□□□□□ -0.77
CTNNA1-237ENST00000523275 DNHD1Q96M86 4753 aa10.22□□□□□ -0.77
CTNNA1-237ENST00000523275 FBN3Q75N90 2809 aa10.22□□□□□ -0.77
CTNNA1-237ENST00000523275 IGKV1D-42A0A075B6H8 117 aa10.22□□□□□ -0.77
CTNNA1-237ENST00000523275 PRORSD1PA6NEY8 169 aa10.22□□□□□ -0.77
CTNNA1-237ENST00000523275 RNF212BA8MTL3 300 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms