RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 GMEB1Q9Y692 573 aa18.09■□□□□ 0.49
SDCBP-209ENST00000522243 A0A096LPE4 126 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 A0A1W2PPZ6 126 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 GRPRP30550 384 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 NUDT6P53370 316 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 RGS8P57771 180 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-209ENST00000522243 NCALDP61601 193 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 IL1RL1Q01638 556 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 DMTNQ08495 405 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 NRF1Q16656 503 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 PRIMA1Q86XR5 153 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 HIPK4Q8NE63 616 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 DNAJA4Q8WW22 397 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-209ENST00000522243 OXGR1Q96P68 337 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 ZNF607Q96SK3 696 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 B3GAT1Q9P2W7 334 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 LEF1Q9UJU2 399 aaPredicted RBP18.08■□□□□ 0.48
SDCBP-209ENST00000522243 SLC13A4Q9UKG4 626 aa18.08■□□□□ 0.48
SDCBP-209ENST00000522243 AIM2O14862 343 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 OR2T1O43869 369 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 UBE2NP61088 152 aaKnown RBP18.07■□□□□ 0.48
SDCBP-209ENST00000522243 ROR2Q01974 943 aaKnown RBP18.07■□□□□ 0.48
SDCBP-209ENST00000522243 C1DQ13901 141 aaKnown RBP18.07■□□□□ 0.48
SDCBP-209ENST00000522243 SELPLGQ14242 412 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 OR1Q1Q15612 314 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 FAM69AQ5T7M9 428 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 HMBOX1Q6NT76 420 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 ZNF544Q6NX49 715 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 ULK3Q6PHR2 472 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 DHDDSQ86SQ9 333 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 RETREG3Q86VR2 466 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 ARMC8Q8IUR7 673 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 SMYD1Q8NB12 490 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 BCL2L2Q92843 193 aaPredicted RBP18.07■□□□□ 0.48
SDCBP-209ENST00000522243 LINC00470Q9BZP3 86 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 RABEP2Q9H5N1 569 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 TMEM27Q9HBJ8 222 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 NPHS2Q9NP85 383 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 TESQ9UGI8 421 aaKnown RBP18.07■□□□□ 0.48
SDCBP-209ENST00000522243 ANGPT4Q9Y264 503 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 NDUFAF1Q9Y375 327 aa18.07■□□□□ 0.48
SDCBP-209ENST00000522243 TRAV36DV7A0A075B6V5 113 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 IGHV1-18A0A0C4DH31 117 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 PRORSD1PA6NEY8 169 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 TPST2O60704 377 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 SERPINB7O75635 380 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 ZNF432O94892 652 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 MFN2O95140 757 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 OPN1SWP03999 348 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 MTPNP58546 118 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 RAB35Q15286 201 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 C5orf46Q6UWT4 87 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 PTOV1Q86YD1 416 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 SLC47A1Q96FL8 570 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 BOD1Q96IK1 185 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 RHNO1Q9BSD3 238 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 NELFAQ9H3P2 528 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 ZNF385DQ9H6B1 395 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 OBP2BQ9NPH6 170 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 SELENONQ9NZV5 590 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 KLHL14Q9P2G3 628 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 NIPBLQ6KC79 2804 aaeCLIP18.06■□□□□ 0.48
SDCBP-209ENST00000522243 ALPK2Q86TB3 2170 aa18.06■□□□□ 0.48
SDCBP-209ENST00000522243 IGHV4-30-2A0A087WSY4 118 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 A0A087WUJ7 227 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 A0A0B4J2E0 115 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 A0A1B0GX12 115 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 OR6C65A6NJZ3 312 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 M0R3H8 397 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 ANGPT2O15123 496 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 SLC43A1O75387 559 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 APOBEC3AP31941 199 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-209ENST00000522243 ARF1P84077 181 aaKnown RBP18.05■□□□□ 0.48
SDCBP-209ENST00000522243 CYP51A1Q16850 503 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 FAM91A1Q658Y4 838 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 H1FNTQ75WM6 255 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-209ENST00000522243 NET1Q7Z628 596 aaPredicted RBP18.05■□□□□ 0.48
SDCBP-209ENST00000522243 FBXO17Q96EF6 278 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 ANKRD27Q96NW4 1050 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 SLC38A2Q96QD8 506 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 CGREF1Q99674 301 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 RCE1Q9Y256 329 aa18.05■□□□□ 0.48
SDCBP-209ENST00000522243 A0A0G2JND7 137 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 MS4A18H0YCH9 400 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 M0QX08 132 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 EDF1O60869 148 aaKnown RBP18.04■□□□□ 0.48
SDCBP-209ENST00000522243 FZD7O75084 574 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 HPRP00739 348 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 NQO1P15559 274 aaKnown RBP18.04■□□□□ 0.48
SDCBP-209ENST00000522243 CDH12P55289 794 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 NFYCQ13952 458 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 MS4A18Q3C1V0 323 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 C1QTNF12Q5T7M4 302 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 CARD17Q5XLA6 110 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 ANKRD16Q6P6B7 361 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 GPR137CQ8N3F9 429 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 DPP10Q8N608 796 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 ZNF525Q8N782 197 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 C11orf65Q8NCR3 313 aa18.04■□□□□ 0.48
SDCBP-209ENST00000522243 BHLHE22Q8NFJ8 381 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms