RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 C9orf16Q9BUW7 83 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 KLHL13Q9P2N7 655 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 SIGLEC7Q9Y286 467 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 HIF3AQ9Y2N7 669 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 ESPL1Q14674 2120 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 PHF3Q92576 2039 aaKnown RBP21.56■■□□□ 1.04
PVT1-212ENST00000521951 DOCK7Q96N67 2140 aa21.56■■□□□ 1.04
PVT1-212ENST00000521951 TRGV8A0A0C4DH27 118 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 ADORA3P0DMS8 318 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 GSTM3P21266 225 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 UQCRC1P31930 480 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 AQP2P41181 271 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 CA7P43166 264 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 CASP6P55212 293 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 RPS4XP62701 263 aaKnown RBP21.55■■□□□ 1.04
PVT1-212ENST00000521951 ZP4Q12836 540 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 ANKDD1AQ495B1 522 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 ABLIM2Q6H8Q1 611 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 CD300LDQ6UXZ3 194 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 B3GNT6Q6ZMB0 384 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 SEM1Q6ZVN7 128 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 SLC43A2Q8N370 569 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 MOSPD2Q8NHP6 518 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 EME1Q96AY2 570 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 OSBPL10Q9BXB5 764 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 UCK2Q9BZX2 261 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 ZNF556Q9HAH1 456 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 KIF17Q9P2E2 1029 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 RASD1Q9Y272 281 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 OR6A2O95222 327 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 HPRP00739 348 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 FCGR2AP12318 317 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 RPL18Q07020 188 aaKnown RBP21.55■■□□□ 1.04
PVT1-212ENST00000521951 PUDPQ08623 228 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 COX10Q12887 443 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 LPCAT4Q643R3 524 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 KLHL17Q6TDP4 642 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 CBR4Q8N4T8 237 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 C9orf106Q8NAJ2 232 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 ABHD3Q8WU67 409 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 SLC29A1Q99808 456 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 MCCC2Q9HCC0 563 aa21.55■■□□□ 1.04
PVT1-212ENST00000521951 MBD3L4A6NDZ8 208 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 MBD3L3A6NE82 208 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 MBD3L5A6NJ08 208 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 C11orf98E9PRG8 122 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 SOCS2O14508 198 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 CASQ2O14958 399 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 VAMP5O95183 116 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 STSP08842 583 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 ZNF26P17031 533 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 GNLYP22749 145 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 AHCYP23526 432 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 FXYD6P3P58550 94 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 PPP2R2BQ00005 443 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 RASGEF1BQ0VAM2 473 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 KDM4DQ6B0I6 523 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 ZBTB49Q6ZSB9 765 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 RASSF6Q6ZTQ3 369 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 KIF18BQ86Y91 864 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 MBD3L2Q8NHZ7 208 aaPredicted RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 OXGR1Q96P68 337 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 RBM4BQ9BQ04 359 aaKnown RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 TTYH2Q9BSA4 534 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 RBM4Q9BWF3 364 aaKnown RBP21.54■■□□□ 1.04
PVT1-212ENST00000521951 RNF122Q9H9V4 155 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 B3GAT1Q9P2W7 334 aa21.54■■□□□ 1.04
PVT1-212ENST00000521951 LOC102725191A0A1B0GVB3 256 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 ZNF716A6NP11 495 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 EI24O14681 340 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 TP53P04637 393 aaPredicted RBP21.53■■□□□ 1.04
PVT1-212ENST00000521951 PEX2P28328 305 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 IL1RL1Q01638 556 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 DAG1Q14118 895 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 SLC17A1Q14916 467 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 RNPS1Q15287 305 aaKnown RBP21.53■■□□□ 1.04
PVT1-212ENST00000521951 GTF2IRD2BQ6EKJ0 949 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 GPAT4Q86UL3 456 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 GTF2IRD2Q86UP8 949 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 ATCAYQ86WG3 371 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 TM9SF2Q99805 663 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 SF3B5Q9BWJ5 86 aaKnown RBP21.53■■□□□ 1.04
PVT1-212ENST00000521951 ENKD1Q9H0I2 346 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 FANCFQ9NPI8 374 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 REV1Q9UBZ9 1251 aa21.53■■□□□ 1.04
PVT1-212ENST00000521951 TMEFF2Q9UIK5 374 aaPredicted RBP21.53■■□□□ 1.04
PVT1-212ENST00000521951 ING1Q9UK53 422 aaPredicted RBP21.53■■□□□ 1.04
PVT1-212ENST00000521951 A0A1W2PNV4 684 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 RNF13O43567 381 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 GLI4P10075 376 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 UQCRFS1P47985 274 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 SLC16A1P53985 500 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 PRPS1P60891 318 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 PDK3Q15120 406 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 LRRC36Q1X8D7 754 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 EIF2S3LQ2VIR3 472 aaKnown RBP21.52■■□□□ 1.04
PVT1-212ENST00000521951 SMARCD3Q6STE5 483 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 ZNF620Q6ZNG0 422 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 LRRC75AQ8NAA5 344 aa21.52■■□□□ 1.04
PVT1-212ENST00000521951 FANK1Q8TC84 345 aa21.52■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms