RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, human

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIO-223	ENST00000515710	TEX13C	A0A0J9YWL9	993 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	FTCDNL1	E5RQL4	147 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC22A1	O15245	554 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	F13B	P05160	661 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	GRPR	P30550	384 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	WNT4	P56705	351 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	NFATC3	Q12968	1075 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC35D3	Q5M8T2	416 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	ZNF468	Q5VIY5	522 aa	Predicted RBP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	PAQR6	Q6TCH4	344 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	JAZF1	Q86VZ6	243 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	MARCH9	Q86YJ5	346 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	KIAA1143	Q96AT1	154 aa	Predicted RBP	18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	RASD2	Q96D21	266 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710	TEKT2	Q9UIF3	430 aa		18.17	■□□□□ 0.5
TRIO-223	ENST00000515710		A0A1W2PPW3	197 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	CCRL2	O00421	344 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	OR6A2	O95222	327 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710		P04436	131 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	LIMS3	P0CW19	117 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	LIMS4	P0CW20	117 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC16A1	P53985	500 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	MLLT11	Q13015	90 aa	Predicted RBP	18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	TST	Q16762	297 aa	Known RBP	18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	LCN1P1	Q5VSP4	162 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	OR1J4	Q8NGS1	313 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	ADAMTS14	Q8WXS8	1223 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	FER1L6-AS2	Q96M78	137 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	OPALIN	Q96PE5	141 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	NMNAT3	Q96T66	252 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	NMNAT2	Q9BZQ4	307 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	INPP5E	Q9NRR6	644 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	INIP	Q9NRY2	104 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	PCSK5	Q92824	1860 aa		18.16	■□□□□ 0.5
TRIO-223	ENST00000515710	PLPP3	O14495	311 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	CLU	P10909	449 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	NR4A1	P22736	598 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	IDUA	P35475	653 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	DSCR4	P56555	118 aa	Predicted RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ZP4	Q12836	540 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	AIMP2	Q13155	320 aa	Known RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	DCAF10	Q5QP82	559 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	C3orf33	Q6P1S2	294 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ACBD7	Q8N6N7	88 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	SCAI	Q8N9R8	606 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	LSM14A	Q8ND56	463 aa	Known RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	SACM1L	Q9NTJ5	587 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ERVK13-1	Q9NX77	482 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ZNF346	Q9UL40	294 aa	Known RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	PCNX3	Q9H6A9	2034 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	RNF13	O43567	381 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	EFNA2	O43921	213 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	TFPI	P10646	304 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	LIF	P15018	202 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	GTF2E2	P29084	291 aa	Known RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	CYB561	P49447	251 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	CLK1	P49759	484 aa	Known RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC25A1	P53007	311 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	AQP6	Q13520	282 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	PON3	Q15166	354 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC6A19	Q695T7	634 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	TIGD3	Q6B0B8	471 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	LEG1	Q6P5S2	330 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	C19orf48	Q6RUI8	117 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	LHFPL3	Q86UP9	236 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	KLHL36	Q8N4N3	616 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	SLC25A43	Q8WUT9	341 aa	Predicted RBP	18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	DNAJA3	Q96EY1	480 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	ARL5B	Q96KC2	179 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	TSPAN32	Q96QS1	320 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	DCUN1D5	Q9BTE7	237 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	STMN3	Q9NZ72	180 aa		18.15	■□□□□ 0.5
TRIO-223	ENST00000515710	OR6C68	A6NDL8	312 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	SHISA8	B8ZZ34	492 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	AIRE	O43918	545 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	FZD7	O75084	574 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ATP6V1G1	O75348	118 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	CBR3	O75828	277 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	SBK2	P0C263	348 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	CDKN2A	P42771	156 aa	Known RBP	18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	GGTLC2	Q14390	218 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	TIMM50	Q3ZCQ8	353 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	B3GLCT	Q6Y288	498 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	TMPRSS7	Q7RTY8	843 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	MDGA2	Q7Z553	956 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	BEST3	Q8N1M1	668 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	OR9Q1	Q8NGQ5	310 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	OR52N1	Q8NH53	320 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ZNF417	Q8TAU3	575 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ZNF587	Q96SQ5	575 aa	Predicted RBP	18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ZNF649	Q9BS31	505 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ASCL3	Q9NQ33	180 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ABI3	Q9P2A4	366 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	ITGB1BP2	Q9UKP3	347 aa		18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	CAB39	Q9Y376	341 aa	Predicted RBP	18.14	■□□□□ 0.49
TRIO-223	ENST00000515710	GADD45A	P24522	165 aa		18.13	■□□□□ 0.49
TRIO-223	ENST00000515710	DPP4	P27487	766 aa		18.13	■□□□□ 0.49
TRIO-223	ENST00000515710	NOVA1	P51513	510 aa	Known RBP	18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms