RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 ZNF239Q16600 458 aaKnown RBP18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 MS4A18Q3C1V0 323 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 TMEM225Q6GV28 225 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 PLXDC2Q6UX71 529 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 FANK1Q8TC84 345 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZPLD1Q8TCW7 415 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 SAMD8Q96LT4 415 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 BBC3Q96PG8 261 aaPredicted RBP18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 PLA2G12AQ9BZM1 189 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 SMPD3Q9NY59 655 aaPredicted RBP18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 CDH10Q9Y6N8 788 aa18.24■□□□□ 0.51
CDC42SE2-206ENST00000503291 AQP7P3A6NL99 342 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 RAMP1O60894 148 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 TPOP07202 933 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 POU1F1P28069 291 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 RFX4Q33E94 735 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 EMC4Q5J8M3 183 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZNF585AQ6P3V2 769 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 THSD4Q6ZMP0 1018 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 CLDN22Q8N7P3 220 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 TOR3AQ9H497 397 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZFYVE26Q68DK2 2539 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 CLCA1A8K7I4 914 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 AHRRA9YTQ3 701 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 C11orf98E9PRG8 122 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 NDUFB2O95178 105 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ABOP16442 354 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 CDH2P19022 906 aaPredicted RBP18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 EPHA2P29317 976 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 PUDPQ08623 228 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 NPRL3Q12980 569 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 TAF11Q15544 211 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ALG10Q5BKT4 473 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 RPL13AP3Q6NVV1 102 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ADPRHL1Q8NDY3 354 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 FNDC9Q8TBE3 224 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 RIBC2Q9H4K1 309 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 ENOPH1Q9UHY7 261 aa18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 MCTS1Q9ULC4 181 aaKnown RBP18.23■□□□□ 0.51
CDC42SE2-206ENST00000503291 SYNGR4O95473 234 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 F13BP05160 661 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 CRISP1P54107 249 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 AQP4P55087 323 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 ESRRGP62508 458 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZP4Q12836 540 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 CLEC12AQ5QGZ9 265 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 IGFN1Q86VF2 1251 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 OR8D4Q8NGM9 314 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 FAM57AQ8TBR7 257 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 RDH12Q96NR8 316 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 GABARAPL3Q9BY60 117 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZGRF1Q86YA3 2104 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 KIAA1549Q9HCM3 1950 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 RNF13O43567 381 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 RPL4P36578 427 aaKnown RBP18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 IZUMO2Q6UXV1 221 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 FCRLAQ7L513 359 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 ADGRE4PQ86SQ3 457 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 GPAT4Q86UL3 456 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 LRRC75AQ8NAA5 344 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 MBOAT4Q96T53 435 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 PRRG4Q9BZD6 226 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 KLHL13Q9P2N7 655 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 B3GAT1Q9P2W7 334 aa18.22■□□□□ 0.51
CDC42SE2-206ENST00000503291 KMT2BQ9UMN6 2715 aaPredicted RBP18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 MCIDASD6RGH6 385 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 H0YJX3 145 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 AQP8O94778 261 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 PTGES3Q15185 160 aaKnown RBP18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 Q6ZPB1 254 aaPredicted RBP18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 CD163Q86VB7 1156 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 OR52L1Q8NGH7 329 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 TEX47Q8TBZ9 253 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 TRIB1Q96RU8 372 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 TSSK6Q9BXA6 273 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 FANCFQ9NPI8 374 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 TBC1D23Q9NUY8 699 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 RASD1Q9Y272 281 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 ZNF835Q9Y2P0 537 aa18.21■□□□□ 0.51
CDC42SE2-206ENST00000503291 COL6A6A6NMZ7 2263 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 SHANK1Q9Y566 2161 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC19A2O60779 497 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 VAMP5O95183 116 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 TGM6O95932 706 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 HLA-DOBP13765 273 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 GIPRP48546 466 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 TMEM236Q5W0B7 351 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 PXKQ7Z7A4 578 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 OXGR1Q96P68 337 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 TACO1Q9BSH4 297 aaKnown RBP18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 GRIP2Q9C0E4 1043 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 LOC102725191A0A1B0GVB3 256 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 A0A1W2PNV4 684 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC22A20A6NK97 555 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 KDM4EB2RXH2 506 aaPredicted RBP18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 PRRG2O14669 202 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 CYTIPO60759 359 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 SERPINI2O75830 405 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 GABRA1P14867 456 aa18.2■□□□□ 0.5
CDC42SE2-206ENST00000503291 SLC6A6P31641 620 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms