RNA–Protein interactions for RNA: ENST00000487496.1

SPEN-205, Transcript of spen family transcriptional repressor, humanhuman

TSL 1 (best)

Gene SPEN, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-205ENST00000487496 PTAFRP25105 342 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 CD40P25942 277 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 GRPRP30550 384 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 PCGF2P35227 344 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 CDH12P55289 794 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 CLDN17P56750 224 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 SLC25A3Q00325 362 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 LGALS3BPQ08380 585 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 NPTX1Q15818 432 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 NRF1Q16656 503 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 VMACQ2NL98 169 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 PGGHGQ32M88 737 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 MMEL1Q495T6 779 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 HSP90B2PQ58FF3 399 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 RABL3Q5HYI8 236 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 COQ5Q5HYK3 327 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
SPEN-205ENST00000487496 LINGO2Q7L985 606 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 ABHD12BQ7Z5M8 362 aaPredicted RBP10.04□□□□□ -0.8
SPEN-205ENST00000487496 OR4D11Q8NGI4 311 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 OR6T1Q8NGN1 323 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 OR6S1Q8NH40 331 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 TAMM41Q96BW9 452 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 LRRC58Q96CX6 371 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 BOD1Q96IK1 185 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 OXGR1Q96P68 337 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 MCHR1Q99705 422 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 SH3GL1Q99961 368 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 KLHL14Q9P2G3 628 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 MGAT4BQ9UQ53 548 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 AMDHD2Q9Y303 409 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 MAGED1Q9Y5V3 778 aaPredicted RBP10.04□□□□□ -0.8
SPEN-205ENST00000487496 ZFHX3Q15911 3703 aa10.04□□□□□ -0.8
SPEN-205ENST00000487496 SETD2Q9BYW2 2564 aaPredicted RBP10.04□□□□□ -0.8
SPEN-205ENST00000487496 LOC102725191A0A1B0GVB3 256 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 ZNF587BE7ETH6 402 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 M0R1B8 84 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 MRASO14807 208 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 NPPAP01160 153 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 CD247P20963 164 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 PTNP21246 168 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 CBLP22681 906 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 CRYBA2P53672 197 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 CDH11P55287 796 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 ATP5J2P56134 94 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 PRPS1P60891 318 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 LTBQ06643 244 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 SPOCK1Q08629 439 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 MFSD13AQ14CX5 517 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 MAPRE2Q15555 327 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 HIKESHIQ53FT3 197 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 C1QTNF12Q5T7M4 302 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 INTS11Q5TA45 600 aaKnown RBP10.03□□□□□ -0.8
SPEN-205ENST00000487496 REP15Q6BDI9 236 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 ZNF613Q6PF04 617 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 LINC00114Q6XXX2 140 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 H1FNTQ75WM6 255 aaPredicted RBP10.03□□□□□ -0.8
SPEN-205ENST00000487496 BIVMQ86UB2 503 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 SNX32Q86XE0 403 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 CALHM3Q86XJ0 350 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 RBM45Q8IUH3 476 aaKnown RBP10.03□□□□□ -0.8
SPEN-205ENST00000487496 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
SPEN-205ENST00000487496 ADPRHL1Q8NDY3 354 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 OR8J3Q8NGG0 315 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 SLC41A3Q96GZ6 507 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 ALKBH3Q96Q83 286 aaPredicted RBP10.03□□□□□ -0.8
SPEN-205ENST00000487496 EPYCQ99645 322 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 SMR3AQ99954 134 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 ECSITQ9BQ95 431 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 TMEM43Q9BTV4 400 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 LINC00470Q9BZP3 86 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 MED4Q9NPJ6 270 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 RCE1Q9Y256 329 aa10.03□□□□□ -0.8
SPEN-205ENST00000487496 TRIM64A6NGJ6 449 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 TRIM64BA6NI03 449 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 CPSF4LA6NMK7 179 aaKnown RBP10.02□□□□□ -0.81
SPEN-205ENST00000487496 BBIP1A8MTZ0 92 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 E7EQL1 145 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 MS4A18H0YCH9 400 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 H7C1Q1 480 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 ZNF432O94892 652 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 HPRP00739 348 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 CD8AP01732 235 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 BGLAPP02818 100 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 THY1P04216 161 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 CDKN1AP38936 164 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 MDH1P40925 334 aaKnown RBP10.02□□□□□ -0.81
SPEN-205ENST00000487496 C1DQ13901 141 aaKnown RBP10.02□□□□□ -0.81
SPEN-205ENST00000487496 MS4A18Q3C1V0 323 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 ENTPD8Q5MY95 495 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 SLC22A25Q6T423 547 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 CCDC80Q76M96 950 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 SCAIQ8N9R8 606 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 PCYOX1LQ8NBM8 494 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 OR1K1Q8NGR3 316 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 VANGL1Q8TAA9 524 aaPredicted RBP10.02□□□□□ -0.81
SPEN-205ENST00000487496 SLC26A7Q8TE54 656 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 C10orf82Q8WW14 230 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 RASSF5Q8WWW0 418 aa10.02□□□□□ -0.81
SPEN-205ENST00000487496 GTPBP3Q969Y2 492 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms