RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 TBK1Q9UHD2 729 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 OPN4Q9UHM6 478 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ZDHHC2Q9UIJ5 367 aa9.31□□□□□ -0.92
SMARCC1-205ENST00000483847 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 DNAJC9-AS1A6NH13 148 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CDC14BO60729 498 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 GLRA3O75311 464 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CHEK2O96017 543 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CHRNGP07510 517 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CHRM4P08173 479 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 GUSBP08236 651 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 NUDT17P0C025 328 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CPA3P15088 417 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 MAPK1P28482 360 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 MAGEB1P43366 347 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 CAPZA2P47755 286 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 PGS1Q32NB8 556 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 XKR7Q5GH72 579 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 DCAF12L2Q5VW00 463 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 IL23RQ5VWK5 629 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 NATD1Q8N6N6 113 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 KIF18AQ8NI77 898 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 MIPOL1Q8TD10 442 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 OIT3Q8WWZ8 545 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 LRRC58Q96CX6 371 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 C3orf30Q96M34 536 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 GATA5Q9BWX5 397 aaPredicted RBP9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 TSPYL1Q9H0U9 437 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 POLE3Q9NRF9 147 aa9.3□□□□□ -0.92
SMARCC1-205ENST00000483847 RPL36A-HNRNPH2H7BZ11 118 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 J3QLI3 93 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 FRS3O43559 492 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 LYPLA1O75608 230 aaPredicted RBP9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF432O94892 652 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 HLA-HP01893 362 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ABHD2P08910 425 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF35P13682 527 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ANPEPP15144 967 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 PRTN3P24158 256 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 CXCR1P25024 350 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 CASQ1P31415 396 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 GLRXP35754 106 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 MAP2K6P52564 334 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 CLDN17P56750 224 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 MRPS11P82912 194 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 TUSC1Q2TAM9 212 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 CEACAM16Q2WEN9 425 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ALKBH6Q3KRA9 238 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 GPAT3Q53EU6 434 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 C6orf136Q5SQH8 315 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ATAD3BQ5T9A4 648 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 PRAMEF8Q5VWM4 474 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 PRAMEF7Q5VXH5 474 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 OR4F3Q6IEY1 312 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ZCCHC23Q6ZST2 131 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 C10orf107Q8IVU9 208 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 IL17RDQ8NFM7 739 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 AGR3Q8TD06 166 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 PPP3R2Q96LZ3 170 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF75AQ96N20 296 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 PRPF18Q99633 342 aaKnown RBP9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF416Q9BWM5 594 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 C7orf69Q9H7B7 122 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 NTN4Q9HB63 628 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 GPR35Q9HC97 309 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 B3GNT2Q9NY97 397 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 SEC14L4Q9UDX3 406 aa9.29□□□□□ -0.92
SMARCC1-205ENST00000483847 WNK1Q9H4A3 2382 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 CFAP73A6NFT4 308 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 FAAHO00519 579 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 VAMP5O95183 116 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 AGR2O95994 175 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 IGHV2-5P01817 119 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 FGF4P08620 206 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 G6PDP11413 515 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF14P17017 642 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 PRPS1L1P21108 318 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 FPR2P25090 351 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 PIGFQ07326 219 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 SRSF4Q08170 494 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 EPS8Q12929 822 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 PCLAFQ15004 111 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 FXNQ16595 210 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 CCDC153Q494R4 210 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 PHYHD1Q5SRE7 291 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 MRPL2Q5T653 305 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 REP15Q6BDI9 236 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 SYT10Q6XYQ8 523 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ZNF771Q7L3S4 317 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ANKRD46Q86W74 232 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 GSPT2Q8IYD1 628 aaKnown RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 BCL6BQ8N143 479 aaPredicted RBP9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ANKFN1Q8N957 763 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 CCDC63Q8NA47 563 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 FNDC5Q8NAU1 212 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 OR4A15Q8NGL6 344 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 TAPBPLQ9BX59 468 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 SLC38A1Q9H2H9 487 aa9.28□□□□□ -0.92
SMARCC1-205ENST00000483847 RLIMQ9NVW2 624 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms