RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 SIRPAP78324 504 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MRPS22P82650 360 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CDKL1Q00532 357 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HMGCS1Q01581 520 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 BCL2L1Q07817 233 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF415Q09FC8 603 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GPM6BQ13491 265 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CEACAM7Q14002 265 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RCAN2Q14206 197 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SELPLGQ14242 412 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FASTKQ14296 549 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NR1D2Q14995 579 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ABRAXAS2Q15018 415 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 KIAA0040Q15053 153 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TGFBIQ15582 683 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TAB1Q15750 504 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SNAPC1Q16533 368 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RBBP7Q16576 425 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FAM83EQ2M2I3 478 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TRMT5Q32P41 509 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DNAL1Q4LDG9 190 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PYCR3Q53H96 274 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CARD16Q5EG05 197 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PIGGQ5H8A4 983 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP157Q5JU67 520 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PAGE3Q5JUK9 113 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FAM78AQ5JUQ0 283 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SLC35D3Q5M8T2 416 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ELFN2Q5R3F8 820 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TPRG1LQ5T0D9 272 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MPP7Q5T2T1 576 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GPRC6AQ5T6X5 926 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 HENMT1Q5T8I9 393 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PIP5KL1Q5T9C9 394 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LGSNQ5TDP6 509 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C6orf163Q5TEZ5 329 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GPR157Q5UAW9 335 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C1orf146Q5VVC0 180 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LPCAT4Q643R3 524 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NEK5Q6P3R8 708 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MACC1Q6ZN28 852 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC74BQ6ZQY2 392 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FAM43BQ6ZT52 329 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FRA10AC1Q70Z53 315 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DET1Q7L5Y6 550 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LRRC70Q7Z2Q7 622 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GOLGA7Q7Z5G4 137 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SNX20Q7Z614 316 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 NET1Q7Z628 596 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC91Q7Z6B0 441 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DHDDSQ86SQ9 333 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ADAMTSL2Q86TH1 951 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SYVN1Q86TM6 617 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LCA5Q86VQ0 697 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF547Q8IVP9 402 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 MSRB3Q8IXL7 192 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 KLHDC8AQ8IYD2 350 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DEFB107AQ8IZN7 70 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PGAM4Q8N0Y7 254 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 STK40Q8N2I9 435 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ELMOD1Q8N336 334 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 BBS5Q8N3I7 341 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SFRP1Q8N474 314 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TRAM1L1Q8N609 369 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RNF148Q8N7C7 305 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCNYL1Q8N7R7 359 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 GBP7Q8N8V2 638 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PAPD5Q8NDF8 572 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OR4F6Q8NGB9 312 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OR10S1Q8NGN2 331 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CLHC1Q8NHS4 586 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CFAP61Q8NHU2 1237 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RHEBL1Q8TAI7 183 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PHOSPHO2Q8TCD6 241 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 UBTD2Q8WUN7 234 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 EEF1AKMT1Q8WVE0 214 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 PYDC1Q8WXC3 89 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FGF13Q92913 245 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FAM131CQ96AQ9 280 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ISG20Q96AZ6 181 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SPACA9Q96E40 222 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SPDL1Q96EA4 605 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DTD2Q96FN9 168 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RADILQ96JH8 1075 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 FCRL1Q96LA6 429 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LINC00615Q96LM1 132 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RILPQ96NA2 401 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 TSNARE1Q96NA8 513 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 DGAT2Q96PD7 388 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RAB3IPQ96QF0 476 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ZNF382Q96SR6 550 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 LPAR4Q99677 370 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 OVOL2Q9BRP0 275 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 CCDC28BQ9BUN5 200 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 WRAP53Q9BUR4 548 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 RIOK2Q9BVS4 552 aaKnown RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 BBS2Q9BXC9 721 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 ILKAPQ9H0C8 392 aaPredicted RBP1.22□□□□□ -2.21
CCDC39-203ENST00000473854 C1orf21Q9H246 121 aa1.22□□□□□ -2.21
CCDC39-203ENST00000473854 SPNS1Q9H2V7 528 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms