RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 CENPNQ96H22 339 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 MPP4Q96JB8 637 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 MYCBPQ99417 103 aaPredicted RBP15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 BDH2Q9BUT1 245 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 ANKRD19PQ9H560 264 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 REEP1Q9H902 201 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 CTPS2Q9NRF8 586 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 SERINC1Q9NRX5 453 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 DNAJB9Q9UBS3 223 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 A4GNTQ9UNA3 340 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 EMC9Q9Y3B6 208 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 TESMINQ9Y4I5 508 aa15.19■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A0B4J2E0 115 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A1B0GWA3 101 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A1B0GX12 115 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A1W2PPR1 153 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ELOA3DA6NLF2 546 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 J3KTA2 159 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 CLOCKO15516 846 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 CHP2O43745 196 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ADAM11O75078 769 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 DIRAS1O95057 198 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 GADD45GO95257 159 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 MT-ND1P03886 318 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 CXCR1P25024 350 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 FKBP2P26885 142 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 RRM2P31350 389 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 MAP2K6P52564 334 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ARHGDIAP52565 204 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 CHN2P52757 468 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 MERTKQ12866 999 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ELOA3BQ3SY89 546 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 SLC25A53Q5H9E4 307 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ELOA3Q8NG57 546 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 NINJ1Q92982 152 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ZC3HAV1LQ96H79 300 aaKnown RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 GMPPAQ96IJ6 420 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 PRR14Q9BWN1 585 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 SRXN1Q9BYN0 137 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ADAM19Q9H013 955 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 SEMA6AQ9H2E6 1030 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 PLEKHF2Q9H8W4 249 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 PAQR5Q9NXK6 330 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 SPIN1Q9Y657 262 aaPredicted RBP15.18■□□□□ 0.02
PRPF40A-204ENST00000450303 A6NHS1 94 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 C16orf97H3BN30 126 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 SS18L1O75177 396 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 TACR3P29371 465 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 CCKARP32238 428 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 UGT2B10P36537 528 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 ATP6AP1Q15904 470 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 IQCCQ4KMZ1 466 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 C22orf34Q6ZV56 151 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 RRM2BQ7LG56 351 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 TSEN54Q7Z6J9 526 aaKnown RBP15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 AMIGO2Q86SJ2 522 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 OR6K3Q8NGY3 331 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 SLC38A4Q969I6 547 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 C3orf49Q96BT1 292 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 HS6ST2Q96MM7 605 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 MED18Q9BUE0 208 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 C12orf49Q9H741 205 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 COQ10BQ9H8M1 238 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 NMNAT1Q9HAN9 279 aaPredicted RBP15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 PLSCR4Q9NRQ2 329 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 TMCC3Q9ULS5 477 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 SLC7A7Q9UM01 511 aa15.17■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A1W2PNR3 127 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 TNFRSF11BO00300 401 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 ETV2O00321 342 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 ELK4P28324 431 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 CDH12P55289 794 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 TTC33Q6PID6 262 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 PAMR1Q6UXH9 720 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 LSRQ86X29 649 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 ABHD3Q8WU67 409 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 FOXC2Q99958 501 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 FAM192AQ9GZU8 254 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 CXorf56Q9H5V9 222 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 KRCC1Q9NPI7 259 aaPredicted RBP15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 RHCGQ9UBD6 479 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 OSGIN1Q9UJX0 560 aa15.16■□□□□ 0.02
PRPF40A-204ENST00000450303 TMED7-TICAM2A0A0A6YYA0 188 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 IGHV3-15A0A0B4J1V0 119 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 A0A1W2PRQ8 180 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 FFAR1O14842 300 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 SIAH2O43255 324 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 E2F6O75461 281 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 PRSS23O95084 383 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 TNFAIP8O95379 198 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 NTN1O95631 604 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 RAF1P04049 648 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 RBM34P42696 430 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 SELENBP1Q13228 472 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 DGCR6Q14129 220 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 KEAP1Q14145 624 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 ZNF239Q16600 458 aaKnown RBP15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 FGD3Q5JSP0 725 aa15.15■□□□□ 0.02
PRPF40A-204ENST00000450303 C5orf46Q6UWT4 87 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms