RNA–Protein interactions for RNA: ENST00000448984.1

TRIM49C-201, Transcript of tripartite motif containing 49C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49C, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49C-201ENST00000448984 CLUP10909 449 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ELAVL4P26378 380 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 FAUP35544 74 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 PRKXP51817 358 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 SUCLG1P53597 346 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 CASP9P55211 416 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 SRSF3P84103 164 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 CDK6Q00534 326 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 SRSF4Q08170 494 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 SCARB2Q14108 478 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 KIAA0141Q14154 515 aaPredicted RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 DCST1Q5T197 706 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 C1orf53Q5VUE5 145 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 DCAF12L2Q5VW00 463 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 PTRHD1Q6GMV3 140 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 C11orf88Q6PI97 169 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ACOT7LQ6ZUV0 252 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 DPPA4Q7L190 304 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 PEG10Q86TG7 708 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 LRRTM1Q86UE6 522 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 RANBP3LQ86VV4 465 aaPredicted RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 NPAS3Q8IXF0 933 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 TCEAL8Q8IYN2 117 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ZBTB2Q8N680 514 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ZNF614Q8N883 585 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 C19orf47Q8N9M1 422 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 TEX19Q8NA77 164 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 NUDCD2Q8WVJ2 157 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 OVCA2Q8WZ82 227 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ZNF385AQ96PM9 386 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 SUCNR1Q9BXA5 334 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 WDR13Q9H1Z4 485 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 TMEM38AQ9H6F2 299 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 ZDHHC6Q9H6R6 413 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 PRDM7Q9NQW5 492 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 MED17Q9NVC6 651 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 GPATCH2Q9NW75 528 aa6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 HELZP42694 1942 aaKnown RBP6.9□□□□□ -1.3
TRIM49C-201ENST00000448984 A0A0A6YYC8 382 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TRBV4-1A0A0J9YWV2 114 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 A0A1W2PPH5 198 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 ZNF705EA8MWA4 302 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 I3L1I5 382 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 ITGB1BP1O14713 200 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 FFAR2O15552 330 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 LILRB3O75022 631 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 SLC25A14O95258 325 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 NSA2O95478 260 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 CPSF4O95639 269 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 LRG1P02750 347 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 METTL15P1P0C7V9 234 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR12D1P0DN82 309 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 VSIG10L2P0DP72 767 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 C6P13671 934 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TPT1P13693 172 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 ZNF25P17030 456 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 GPR3P46089 330 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OMPP47874 163 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 CAV2P51636 162 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 SMIM11AP58511 58 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 SKP1P63208 163 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 NAAAQ02083 359 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 INSL4Q14641 139 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TEAD2Q15562 447 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 C2orf68Q2NKX9 166 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 PGBD2Q6P3X8 592 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 Q6ZVU0 165 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 LINGO2Q7L985 606 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 RABEPKQ7Z6M1 372 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 MRGPREQ86SM8 312 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 MRPL52Q86TS9 123 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 LRRC18Q8N456 261 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 LINC00471Q8N535 108 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR52N2Q8NGI0 321 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR52B4Q8NGK2 314 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR10D4PQ8NGN7 298 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 CYB5D2Q8WUJ1 264 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TNFAIP8L1Q8WVP5 186 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 SPRYD4Q8WW59 207 aaPredicted RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 RFKQ969G6 155 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TEX12Q9BXU0 123 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 ZFYVE1Q9HBF4 777 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 RDH14Q9HBH5 336 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 RPS10P5Q9NQ39 176 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 ZDHHC8Q9ULC8 765 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 EXOGQ9Y2C4 368 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 MRPS18CQ9Y3D5 142 aaKnown RBP6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 MAP4K5Q9Y4K4 846 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 PIKFYVEQ9Y2I7 2098 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TRIOO75962 3097 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 GNG14A0A1W2PPG7 69 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TRBC2A0A5B9 178 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 SERTM1A2A2V5 107 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR2AT4A6NND4 320 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 EREGO14944 169 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 OR10H3O60404 316 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 TMEM127O75204 238 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 MOSPD3O75425 235 aa6.89□□□□□ -1.31
TRIM49C-201ENST00000448984 YIF1AO95070 293 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms