RNA–Protein interactions for RNA: ENST00000428361.5

CTDSP1-202, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-202ENST00000428361 ZANQ9Y493 2812 aa13.53□□□□□ -0.24
CTDSP1-202ENST00000428361 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 ARPC4-TTLL3A0A0A6YYG9 625 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 NR5A2O00482 541 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 FZD7O75084 574 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 NDUFS7O75251 213 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 PDE5AO76074 875 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 RPS5P46782 204 aaKnown RBP13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 SELENOPP49908 381 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 IDH3AP50213 366 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 EFNA4P52798 201 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 SQLEQ14534 574 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 ALG10BQ5I7T1 473 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 ULK3Q6PHR2 472 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 B3GLCTQ6Y288 498 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 SNX32Q86XE0 403 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 GPR137CQ8N3F9 429 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 ADPRHL1Q8NDY3 354 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 PIK3C3Q8NEB9 887 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 OR10H5Q8NGA6 315 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 OR6S1Q8NH40 331 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 NFKBIDQ8NI38 313 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 STON2Q8WXE9 905 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 FAM168AQ92567 244 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 PROX1Q92786 737 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 TMEM27Q9HBJ8 222 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 MYOZ1Q9NP98 299 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 ANGPT4Q9Y264 503 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 CHST2Q9Y4C5 530 aa13.52□□□□□ -0.25
CTDSP1-202ENST00000428361 CHD3Q12873 2000 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 LOC102725191A0A1B0GVB3 256 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 FTCDNL1E5RQL4 147 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 ATP6V1G2-DDX39BF2Z307 99 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 RPL36A-HNRNPH2H7BZ11 118 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 LGI1O95970 557 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 NUDT7P0C024 238 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 HOXB9P17482 250 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 CLDN17P56750 224 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 RGS8P57771 180 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 IL1RL1Q01638 556 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 KRTAP1-1Q07627 177 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 LOXL1Q08397 574 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 HIKESHIQ53FT3 197 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 SWT1Q5T5J6 900 aaKnown RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 H1FNTQ75WM6 255 aaPredicted RBP13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 PRIMA1Q86XR5 153 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 EPHX4Q8IUS5 362 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 MAPK1IP1LQ8NDC0 245 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 HIPK4Q8NE63 616 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 OR4F15Q8NGB8 312 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 ATP6V1G3Q96LB4 118 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 PTDSS2Q9BVG9 487 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 B3GAT2Q9NPZ5 323 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 TRIM33Q9UPN9 1127 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 MOKQ9UQ07 419 aa13.51□□□□□ -0.25
CTDSP1-202ENST00000428361 IGHV4-30-2A0A087WSY4 118 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 A0A1B0GWA3 101 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 A8MV72 311 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 NDUFS8O00217 210 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 ERCC1P07992 297 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 GPX2P18283 190 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 PTNP21246 168 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 AQP5P55064 265 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SLC25A3Q00325 362 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 ROR2Q01974 943 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 EGR4Q05215 589 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SCARB2Q14108 478 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 AGKQ53H12 422 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 PODNL1Q6PEZ8 512 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SCAIQ8N9R8 606 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 IL17RDQ8NFM7 739 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 KTI12Q96EK9 354 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 TNFRSF13CQ96RJ3 184 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 ASPNQ9BXN1 380 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SLCO1B3Q9NPD5 702 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 YAE1D1Q9NRH1 226 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 CA10Q9NS85 328 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SLC25A37Q9NYZ2 338 aa13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 CRNNQ9UBG3 495 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 LEF1Q9UJU2 399 aaPredicted RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
CTDSP1-202ENST00000428361 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 B9A039 149 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 M0R082 166 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 ENTPD5O75356 428 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 F12P00748 615 aaPredicted RBP13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 NQO1P15559 274 aaKnown RBP13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 PDLIM4P50479 330 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 RBBP4Q09028 425 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 CHRFAM7AQ494W8 412 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 HIPK1Q86Z02 1210 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 ARMC8Q8IUR7 673 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 FUNDC1Q8IVP5 155 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 SLC30A8Q8IWU4 369 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 UEVLDQ8IX04 471 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 C11orf65Q8NCR3 313 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 ZNF417Q8TAU3 575 aa13.49□□□□□ -0.25
CTDSP1-202ENST00000428361 RNF217Q8TC41 542 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms